Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0729 ATGGAAAACTACTACTATTCTGGATGGCCTCAATCTCAATGCAACAACTCTGCACCAAACAGTAACAATAATTCTTCCTTTTCAGTACCAACACAGATAGTGCCTCATGCCTATGACTCAGCCTTTGCCTCTCTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTCATTCCTAAGTCTGATAAGATGGACAAGGCTGCATTACTAGGGAGTGTAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCAATGGATGTGAGCAAAAGCATCACAGTTCCAAGTGAAACTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTGAAGCACAACATTGTAATTTCAGTTTGCTGTGATGATAGACCAGAACTTTTCAATGAACTCATTCAAGTCTTAAAAGGGTTGAGGCTCACAGCAGTTAAAGCTGACATAGCAAGTGTTGGTGGCAGAATCAAGAGCATATTGGTGCTATGCTCTAAGGAAAATGAAGAAGGTGGTGATGGTGTTTGCCTTAACACTCTCAAACAATCACTGAAATCTGCTGTTAACAAAATTGCTTCATCATCCATGACATCAAATTGTCCCACAAGAAGTAAGAGGCAAAGGTTCTTCTTGCCTTCACATTTCATACAGTGA 771 0.4047 MENYYYSGWPQSQCNNSAPNSNNNSSFSVPTQIVPHAYDSAFASLQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMDVSKSITVPSETDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFNELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKENEEGGDGVCLNTLKQSLKSAVNKIASSSMTSNCPTRSKRQRFFLPSHFIQ* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0729 256 PANTHER TRANSCRIPTION FACTOR BHLH30 24 254 IPR045847 GO:0003700|GO:0006355
Ahy7g0729 256 PANTHER TRANSCRIPTION FACTOR BHLH51 24 254 - -
Ahy7g0729 256 Gene3D - 60 123 IPR036638 GO:0046983
Ahy7g0729 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 118 IPR036638 GO:0046983
Ahy7g0729 256 SMART finulus 71 120 IPR011598 GO:0046983
Ahy7g0729 256 CDD ACT_UUR-ACR-like 158 195 - -
Ahy7g0729 256 CDD bHLH_AtAIG1_like 60 137 - -
Ahy7g0729 256 Pfam Helix-loop-helix DNA-binding domain 68 114 IPR011598 GO:0046983
Ahy7g0729 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 114 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0729 Ahy-Chr7 8402921 8404805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0729 1 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 40.075 5.11e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy7g0729 HLH 7.90E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0729 - - gmx:100799687 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0905 17 10595145 10596977 Ahy7g0729 7 8402921 8404805 hybridization
Ahy20g1384 20 31311200 31312453 Ahy7g0729 7 8402921 8404805 PCT
Ahy7g0729 7 8402921 8404805 Ahy20g1384 20 31311200 31312453 PCT