Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0725 ATGTCGGCGCCCAACCACGACTATCACAAATTCGACTGGCACTTCAACACGGAGCTCGAGGACGAGACCATCGAACTCCGAGGCCGGAGGCTCATCTTTGTTATCGTCCTCTTCGTCATTATCCTCATCACCACCGCCTTCTTCGTCTACCTCCGCTGGATCTGCCGCTCCCGCGGTCTCATCCCGGTCACATCGATCCACCTCCGCCACCAGTTGCCGCCGCACACTCAACCTCAGTCCAACGGCCTGGACGCCGCCACCATCAAGAAACTCCCGATCGTGCTCTACCAGGCGCCGCCAACTGCGTCTGCGACAGATCTGAACCGCGGCGGCGCGTTGGAATGCTGCATATGCCTGAGCGCGTTCCGCGACGGAGAGAAGCTGAAGACTCTTCCCGGTTGCAAGCACCGATTCCACTGCGAGTGCGTAGACAAGTGGCTCACGAATCACTCGAGTTGCCCGTTGTGCAGAGCTTCTCTCAAGCTCGCTCCTCCATTACCGAGGATTTTGTATCCAGAACCTCCCATTAGAATCACTATTAACAATGAAGAACAATGA 558 0.5681 MSAPNHDYHKFDWHFNTELEDETIELRGRRLIFVIVLFVIILITTAFFVYLRWICRSRGLIPVTSIHLRHQLPPHTQPQSNGLDAATIKKLPIVLYQAPPTASATDLNRGGALECCICLSAFRDGEKLKTLPGCKHRFHCECVDKWLTNHSSCPLCRASLKLAPPLPRILYPEPPIRITINNEEQ* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0725 185 PANTHER RING-H2 FINGER PROTEIN ATL66 5 167 - -
Ahy7g0725 185 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 167 IPR044675 -
Ahy7g0725 185 SUPERFAMILY RING/U-box 92 164 - -
Ahy7g0725 185 Pfam Ring finger domain 114 157 IPR001841 -
Ahy7g0725 185 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Ahy7g0725 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 162 IPR013083 -
Ahy7g0725 185 SMART ring_2 115 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0725 Ahy-Chr7 8279222 8280286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0725 13 162 C3H Transcription Factor Family AT3G11110 37.748 5.26e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0725 - - adu:107496923 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0898 17 10493852 10494983 Ahy7g0725 7 8279222 8280286 hybridization
Ahy20g1381 20 31213933 31220202 Ahy7g0725 7 8279222 8280286 PCT
Ahy7g0725 7 8279222 8280286 Ahy20g1381 20 31213933 31220202 PCT