Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0717 ATGTGGTTCCCCTTAAATAGCGATGCATACACACACATGACACATCCATATTCATTTCTTGTTATGAAAAAATCAGGAGGAGGAGCCATCATGAAGGGTTACGAGCCACGTTCAAGTTCTTCTTGTGCCGCCTGCAAATTCTTGAAGAGAAGGTGCATCCCTAACTGCATATTCGCCCCTTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTTCACAAGGTCTTCGGTGCCAGCAATGTCAGCAAGATCCTCGTCGAGGTCCCCGAGGACCAGCGGGAAGACACCGTCAACTCCCTCGCCTACGAGGCCGAGGCCCGCCTCCGCGACCCTGTTTACGGCTGCATTGGCGCCATTGCTCTCCTCCAGAGGAAAATGCTCGAGCTTCAGCACGATCTCGCCATTGCCAAGGATCGTCTTGCTCGCTATTCTGCTGTTGCTGCTACTGCTACTGCTGATGCTACTTCTCTTATTACTTCTTCCTCTTCTTCCTCCGATAACATCTTTCATTTCAATCATTCTCAAGTTTCCTTGCCTCCTTTCCCTGAATTCCCTTCTTCCTCTGATTTCAATGACACTGCTGCTTTCTGCCACGCCTCTTCTTCTTCCTCTCAATCCTTTCCCACCACTGTAGTCGACGATTTCATTCAAATTCCATATATATTTTAG 672 0.4866 MWFPLNSDAYTHMTHPYSFLVMKKSGGGAIMKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEDQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQHDLAIAKDRLARYSAVAATATADATSLITSSSSSSDNIFHFNHSQVSLPPFPEFPSSSDFNDTAAFCHASSSSSQSFPTTVVDDFIQIPYIF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0717 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 31 169 - -
Ahy7g0717 223 Pfam Lateral organ boundaries (LOB) domain 41 138 IPR004883 -
Ahy7g0717 223 Coils Coil 120 140 - -
Ahy7g0717 223 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
Ahy7g0717 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 31 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0717 Ahy-Chr7 8156160 8157108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0717 31 147 AS2 family AT3G11090 77.778 8.11e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy7g0717 LOB 1.70E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0717 - - aip:107608172 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0893 17 10369825 10370549 Ahy7g0717 7 8156160 8157108 hybridization