Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0715 ATGGATTGTGATGCTCTTACTCTATCCACTATGACTATCTCTTCACCAGGATTGTTACCAACTGAGACATTGTTAGATTCTTTGGTTCACATATCCAATGAAGTTGTCTCAATAGAGAAGCTTCCATTTGTGCAAATGAGGAATGTCTCATCCATGATAAGGAGGATCAAGCTTCTCTCTTCATTGTTTGAAGAGATTCAAGAGGCAGAAACACCACTCCCTCCTTCTTCAACTCTTTGCTTCACTGAGCTTTTATCAGTGATCACAAGGGGTAAGGTTTTGATCCAAGAAATCAAAGATGCAAGCACCCTTTGGGGCCTGATTCAGTTAGAATTCATCTCAAACCAATTCTATGTTCTTGTTAAAGAGATGGGAAGAGCCCTTGATATCTTGCCTCTTAGATTGCTCAACATAACTGCAGATATAAGGGAGCAAGTGGATCTTCTTCACAAACAAGCGAAGCGAGCCGAGTTAACCATTGATCCTAGAGAGCTCCAAAGAAGAGAAATGCTTCTAGAAGTAATGGCCAACAACATGATGCAAAACAAGAAGAACAAGGGCTATATGGATTTTGGTAAAATGGAAGAACTGTTAAGTAGCATTGGTTTGAGAACTATATCAGATTATGATATAGAAATTTCAAAGTTGGAGATTGAAGCTCAGAATCAAGCAGGAACAGGAGGACTAGTGGTTGTGTCAAACATAAACAACCTCATATCTCTTGTTTCTTATTCCAAATCAATGATTTTCAGAGATGGAGAAAATGAAGAAAGTAAGAAAGAATCTTGTTCATATTTGTACAACAAAGTCAATGATAGTTCTTCATCTTCTCAATCCATGTCAATTCCTGACGAATTTCGCTGCCCAATTTCACTTGACTTAATGAGAGATCCTGTGATTGTTTCATCCGGCCACACATATGATCGAAATTCGATTGCGCAGTGGATAAACTCTGGCCACCATACTTGCCCCAAAAGTGGACAGAGGCTAATCCACACTGCTCTGATACCAAACTATGCACTGAAAAGTCTTGTTCAGCAATGGTGCTATGACAACAATGTTCCATTGAATGAGCCTAATTCTTCAGTTTCCGAGGAAAAGAGCAATAAGAAGAACTCAAATGACGGCGCTATTGATCACATCTCTGCCAACAAAGCGGGTGCAGATGCTGTGAAAATGACAGCAGAGTTTCTGGTTGGAAAATTGGCAACAGGCTCAGCTGACACACAAAGACAAGCTGCCTATGAGCTTCGTTTACTGGCGAAAACCGGCATGGACAACCGGCGAATCATAGCTGAGGTAGGTGCTATTCCTTTTCTGGTAACACTACTTGGATCACATGATCCAAGAATCCAGGAACATGCAGTGACTGCCATGTTCAACCTATCAATCTATGATAACAACAAGGTTCTGCTCATGTCGGCCGGCGCAGTGGACAAAATAGTCCAAGTTCTAGAACAAGGGAGAACAATGGAAGCCAGAGAGAATGCTGCAGCAACAATATTCAGCTTGAGTATGTTAGATGACTGCAAGGTTCAAATCGGAGCGCGGCCAAGGGCGGTTCCTGCATTAGTCCTCCTCTTGAAAGAAGGCACACCAATTGGGAAAAGAGATGCAGCAACTGCACTATTCAATCTTGCAGTTTACAATCCAAACAAATCAATAATTGTGAGTTCTGGTGCAGTTGATGTGCTTATTGAATTGCTAATGGATGATAAAGCTAGCATTACTGATGATGCATTATCAGTTCTTGCTTTGTTACTTGGATGCTCACAAGGACTAAAAGAAATAAGGAATAGTAGAGAGTTGGTGCCACTTCTCATTGATCTTCTAAGATTTGGATCAGTCAAAGGGAAGGAAAATTCTATAACACTTCTTCTAGGATTGTGCAAGGAAGAGACCGAGGTGGTTGCGCGGCGGTTGCTGGCGAATCCAAGGAGCGTGCCGTCGCTTCAAAGCTTGGCTGCTCATGGTTCATTGAGAGCTAGAAGGAAGGCTGATGCATTGTTAAGGTTGCTCAATAGATGTTGCTCTCAGCCTCATCATTCTCTTTGA 2055 0.4175 MDCDALTLSTMTISSPGLLPTETLLDSLVHISNEVVSIEKLPFVQMRNVSSMIRRIKLLSSLFEEIQEAETPLPPSSTLCFTELLSVITRGKVLIQEIKDASTLWGLIQLEFISNQFYVLVKEMGRALDILPLRLLNITADIREQVDLLHKQAKRAELTIDPRELQRREMLLEVMANNMMQNKKNKGYMDFGKMEELLSSIGLRTISDYDIEISKLEIEAQNQAGTGGLVVVSNINNLISLVSYSKSMIFRDGENEESKKESCSYLYNKVNDSSSSSQSMSIPDEFRCPISLDLMRDPVIVSSGHTYDRNSIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQQWCYDNNVPLNEPNSSVSEEKSNKKNSNDGAIDHISANKAGADAVKMTAEFLVGKLATGSADTQRQAAYELRLLAKTGMDNRRIIAEVGAIPFLVTLLGSHDPRIQEHAVTAMFNLSIYDNNKVLLMSAGAVDKIVQVLEQGRTMEARENAAATIFSLSMLDDCKVQIGARPRAVPALVLLLKEGTPIGKRDAATALFNLAVYNPNKSIIVSSGAVDVLIELLMDDKASITDDALSVLALLLGCSQGLKEIRNSRELVPLLIDLLRFGSVKGKENSITLLLGLCKEETEVVARRLLANPRSVPSLQSLAAHGSLRARRKADALLRLLNRCCSQPHHSL* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0715 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 435 477 IPR000225 GO:0005515
Ahy7g0715 684 CDD RING-Ubox_PUB 286 328 IPR045210 -
Ahy7g0715 684 SUPERFAMILY ARM repeat 395 673 IPR016024 -
Ahy7g0715 684 Gene3D - 519 673 IPR011989 -
Ahy7g0715 684 MobiDBLite consensus disorder prediction 358 379 - -
Ahy7g0715 684 ProSiteProfiles U-box domain profile. 281 355 IPR003613 GO:0004842|GO:0016567
Ahy7g0715 684 Gene3D - 377 517 IPR011989 -
Ahy7g0715 684 SMART arm_5 590 631 IPR000225 GO:0005515
Ahy7g0715 684 SMART arm_5 465 506 IPR000225 GO:0005515
Ahy7g0715 684 SMART arm_5 424 464 IPR000225 GO:0005515
Ahy7g0715 684 SMART arm_5 549 589 IPR000225 GO:0005515
Ahy7g0715 684 SMART arm_5 510 548 IPR000225 GO:0005515
Ahy7g0715 684 SMART Ubox_2 285 348 IPR003613 GO:0004842|GO:0016567
Ahy7g0715 684 Pfam Armadillo/beta-catenin-like repeat 550 585 IPR000225 GO:0005515
Ahy7g0715 684 Pfam Armadillo/beta-catenin-like repeat 426 463 IPR000225 GO:0005515
Ahy7g0715 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515
Ahy7g0715 684 PANTHER U BOX DOMAIN-CONTAINING 21 681 - -
Ahy7g0715 684 Pfam U-box domain 282 352 IPR003613 GO:0004842|GO:0016567
Ahy7g0715 684 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 21 681 - -
Ahy7g0715 684 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 367 IPR013083 -
Ahy7g0715 684 SUPERFAMILY RING/U-box 272 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0715 Ahy-Chr7 8140163 8142361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0715 27 679 U-box Gene Family AT3G46510 37.195 1.04e-127 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0715 - - gmx:100793498 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0891 17 10336273 10338499 Ahy7g0715 7 8140163 8142361 hybridization