Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0701 ATGGGTGGGAATTCACCGTGTGCCTCATGCAAGCTTCTGAGACGCAGGTGCACCAAAGATTGTGCATTTGCTCCTTATTTCCCTGCTGATGAACCCCACAAGTTTGCCATAGTCCACAAAGTTTTTGGCGCTAGCAACGTTAGCAAAATGTTGCAGGAACTTCCGGTGGAGCAAAGAGCAGATGCAGTGAGCAGCCTAGTGTACGAGGCGAATGCGAGGGTCCGGGATCCGGTGTACGGGTGTGTCGGAGCCATATCATACCTTCAAAACCAAGTCTCAGAGCTTCAAATGCAGCTAGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGCAGCAGCAAGTAGAAGAAGATCCACCAGTGATGATGATGATGATGCCACCACCTCAACTCTCAAATGAAAATGAACTCTCTCATCATCACTACTTCACTACTTTTGGATCTTCTTCTACCAATAATGTAATTCATGATTCCTTCAAGAGACAAAGTGTTTTTGGACATGACATGGTTTCTTGA 516 0.4632 MGGNSPCASCKLLRRRCTKDCAFAPYFPADEPHKFAIVHKVFGASNVSKMLQELPVEQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQQVEEDPPVMMMMMPPPQLSNENELSHHHYFTTFGSSSTNNVIHDSFKRQSVFGHDMVS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0701 171 Coils Coil 85 105 - -
Ahy7g0701 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 128 - -
Ahy7g0701 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 128 - -
Ahy7g0701 171 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Ahy7g0701 171 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0701 Ahy-Chr7 8016109 8017498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0701 3 114 AS2 family AT2G30130 90.179 3.46e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy7g0701 LOB 8.40E-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0701 - - cit:102614863 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0873 17 10077957 10079237 Ahy7g0701 7 8016109 8017498 hybridization
Ahy20g1350 20 29281714 29282762 Ahy7g0701 7 8016109 8017498 PCT
Ahy7g0701 7 8016109 8017498 Ahy20g1350 20 29281714 29282762 PCT