Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0694 ATGTTGTCATGCAACGACTGCACGAAATTCAAGACCCTTATAGATTTCTCCGCTTCTCTCTCTTCACTCAGTCACTCACCACTCTCAACTACTTCACTTCCAACAACATTATTACCCCTTCTTTTCACACTGTTCCCTTGTTCTTACTTCACTCTCTCTCTCTTTCTCTCTCTCAACTCTGATGATGCTACTTTAGATTCTCCCACCTCAACCCCTGCTATCTGCTACCATAATCTTGTGATTCTCAATATGGTAGGAAAAAGGAAGTATTTGCATCAATCCAAGCATCCATTCAATGCTTACCCCTTTGAAGCATGTGTGTATGGTTCATGGAAAGCGGTGGAGTTCATAAAAATTGAGTATGGAGTTATGTCCATACATTTCATTGATAAACGCCATATTTCTATGGAAAAAGGCCCCTCTGCAGACGTTCGGATAAGGTCGAGAATAGCTACTACTGCAGATTGCTCCTGCATTTTACGACGGGGAATTGATGTATGTGTGCTATCATCTCCTCAAGGAACTGGTGATTCGGATGAATTTGGTGCTCGCGAGCCTGTTTGGAGAGATGCTAGAATTAGTTCTATACAGAGAAAGCCCCATGATTCTGAGTGCACATGCCAATTTTATGTCAACTACTATGTTAATCAAGGTTCGCTTGGTGCAGAGATGAAAACGCTTAACAAGGATATTAATGTGGTTGGATTAGATCATATCTTCATCCTCCAAAGGCTTGAACATACACATTGTGATGAAGATCAGCACTATCGGTGGACTTCAACAGAGGACTGCTCTAGAATACCACAAACTAGATTGCTGTTGGGGAAATTTTTACCTGATATTTCGTGGTTGATCGCGACATCTGTTTTAAAGAAGGTTTCTTTCTTTATAAGATCTGTGGAAAACAAGCTTGTTTATGAAGTTCTGTCAAATGACATTGTTATCCCTCCGTTCCATACCGAGTCTCATATAAATGTTGTAAACTTCAAACTGGAGAAAGACATGCTAATACCTATTGTTTCTCAAGTTATTGTATCCAGAACTGAGAGGGTTGACTATGAACATCAAGAATCCCATGAAGATGAGGTGTCACCATCATCATATAATGTTCAAGGCTTACGGCGTTCCAAGCGTCGACATGTACAACCTGACCGTTACCTTGGTTGCAATAGTGCTCCTGAGCTCAATATTGGTACTATTAGAACAAGGCCATACAAATTAGGCACATGGGAACAAGTTGATGAAGATCATGAACTGTCAATGCCATTATCTTCCCTGTTTGGATTGAAACAAATCAGTCAAGATCAGGATCTTGATAGTAGTCCTAAGGAGGACAAGGTGAACGGTTGCCAGGAGATTATAGTGTACAACAGGAGGGCTAAAGCCAAGGAGGCGAAGACAGGCGATGCTGATCGAGACATACAGCTCAATGAACTTGCTATTATTCCTCATCCTACTCTTAAACATCATAAGCTCAATGACATGAATTGTAGAATTGGCAAACAAGAACCAGACGAAACTCCTTCGAAATATAGTCATCTGGTTAATACCACTAAGCAGAGAAGGAATAGTGTCAATCTGTTGAATTTCAATCCAGATAATGTGCTTGCGCAGTTAGAGGAGGTGGAGAAAAGTGATGGTTTTTCTTCAAGATTGCATTATACTTATAGTTACAGCACCTCCAAGTTTCAGAGGAAGGCTTTAAGTGATCTTGATGATATGAATCTTGCACCAAAATGGGAAGGCATACATTCCAGTAAGGGAGCTCAAGATAGAAGGTACCGTCCGACATTTTCGAGAAATAGACATCCTGATGAAGAAAGAACTTATAAAGACAGAACATTGAATGCCACAGCCTACAAGGAGTTGATAAATTCCTACTTAAAGAATATTAACACGAAACCAACGAAAGAAGAAATGCCTATTAGTGACCAGTGGAAGCAGTTCCAGGATTCACGCAGTGTCGGGAAAACGAAGGAAATACAAATATCCGATACCGATTATGCAGAAGAAACCTCTGAGTTGGATAATTTGTGGAGAGAAATGGAAGTGTCTCTGGCATCAAGTTACATTGAAGACACAGAGGATGCGAATGCAGCCAATCTTTTCGACACTCAGGAAAAATCAAAGGAAGCTTGTGAACATTACTTTAGATTGGATGATGAAATTGGAATTTGCTGCAAGAAATGTGGCTTTGTGGAGATGGACATTAAAGCTATCACACCAGCCTTTCTTCAACATTCAGTGTGGCACCAAGAGGAGAGGCAGAACGACGGCAAAGAAGATGCAGAATCGAAGGCTGCTGAATTTGAAGATTTCAATCTTGTCTCAAATGTTGAGAATGAAGATGAACCTGTATCAGTGGAACATGATAATGTGTGGGCATTAATTCCGGATCTTCGAAAGAAGTTGCACCTCCACCAAAAGAAAGCTTTTGAGTTTCTTTGGAGAAACATTGCCGGGTCTACAGAACCAGCACTTATGGACAAGAACTCCAGAAAAAGAGGTGGCTGTGTGATATCTCATACTCCGGGAGCCGGAAAAACTTTCCTGATTATTGCTTTTCTAGTTAGCTACTTGAAGTTATTCCCGGGAAAGAAACCTCTAGTCCTTGCACCAAAAACAACACTTTATACCTGGTATAAAGAATTTATCAAGTGGGAGATTCCAATACCGGTGTATCTAATTCATGGTCGAAGAACCTACAGGGTATTCAACCAGAAACAATCAATGGTTTTTCCCGGAATGCCAAAGCCGACGGAGGATGTCAAGCATGTTTTGGATTGCCTAGAGAAAATACAGAAGTGGCATTCACACCCGAGTGTTCTAATCATGGGATATACTTCATTTTTGACATTGATGCGAGAGGATTCAAAGTATGCACATAGAAAGTATATGGCTAAAGTTCTGAGGGAAAGTCCCGGACTCCTAGTATTGGATGAAGGGCACAATCCAAGAAGCACCAAGTCCAGGTTGAGGAAAGTTTTGATGAAGGTACAAACAGAATTAAGAATACTGCTGTCTGGCACATTGTTTCAGAACAATTTCTGTGAATACTTCAACACTCTCTTGTTGGCAAGACCAAAGTTTGCACATGAGGTGCTGAAAGTATTAGACCCAAAATACAAGAAGAAGAAAGGAAAAGTGAGGGCAGTGGAGTACCGGGCAAGGAAATTCTTCATAGAAGTGATCTCTAGGAAAATCGACTCGAACAATGGCGAGGAGAGGATGCAAGGTCTTAACATGTTGAGAAATTTAACAAATGGTTTTATAGATGTTTATGAAGGTAGTAGCTCGGATGACCTACCCGGTTTGCAAATTTATACTTTGTTGATGAACACAACCGATATGCAGCATGAGATGTTGAAGAGACTGCACAAGAAAATGCAAAAGTGCAATGGATATCCTCTGGAGTTAGAGCTTTTGATAACTCTTGGGTCCATACATCCTTGGTTGATCAAAACTGCTGTATGTGCTAACAAGTTTTTCACAATGGAGGAACTGAGGGAGCTAGAGAAATGCAAGTTTGATTTGAAGATGGGGTCTAAGGTAAAATTTGTTATGAGTCTTATCTATCGCGTGGTCCAGAAGGAGAAGATCCTCATCTTCTGCCACAACATTGCACCAGTGAAGTTATTTATAGAATATTTTGAGTTGTTCTTCAAATGGCAAAAAGGGCGGGAAATTCTGGTGTTAACCGGGGAGCTAGAGCTCTTCGAGCGCGGCAGAGTGATGGATAAGTTTGAGGAACCTGGTGGAGTTTCAAAGATACTCCTTGCTTCGATTACAGCTTGTGCCGAAGGCATTAGTTTGACGGCAGCTTCTCGGGTGATCATGCTGGATTCCGAGTGGAATCCGTCGAAAACAAAGCAGGCCATCGCAAGGGCTTTTCGTCCCGGCCAGCAGAAAATGGTGTATGTGTATCAGCTCCTGGTAACCGGTTCGTTGGAGGAAGATAAGTACCGAAGAACCACATGGAAAGAGTGGGTGTCAAGCATGATTTTCAGTGAGGAGTTTGTGGAGGATCCTTCCCAATGGCAAGCTCAGAAGATTGAAGATGAAATCCTGAGGGAAATGGTTGAGGAGGACAAGTCCAAGTCATTCCATATGATTATGAAGAATGAAAAGGCTTCAACAAACAACAGATAA 4149 0.4136 MLSCNDCTKFKTLIDFSASLSSLSHSPLSTTSLPTTLLPLLFTLFPCSYFTLSLFLSLNSDDATLDSPTSTPAICYHNLVILNMVGKRKYLHQSKHPFNAYPFEACVYGSWKAVEFIKIEYGVMSIHFIDKRHISMEKGPSADVRIRSRIATTADCSCILRRGIDVCVLSSPQGTGDSDEFGAREPVWRDARISSIQRKPHDSECTCQFYVNYYVNQGSLGAEMKTLNKDINVVGLDHIFILQRLEHTHCDEDQHYRWTSTEDCSRIPQTRLLLGKFLPDISWLIATSVLKKVSFFIRSVENKLVYEVLSNDIVIPPFHTESHINVVNFKLEKDMLIPIVSQVIVSRTERVDYEHQESHEDEVSPSSYNVQGLRRSKRRHVQPDRYLGCNSAPELNIGTIRTRPYKLGTWEQVDEDHELSMPLSSLFGLKQISQDQDLDSSPKEDKVNGCQEIIVYNRRAKAKEAKTGDADRDIQLNELAIIPHPTLKHHKLNDMNCRIGKQEPDETPSKYSHLVNTTKQRRNSVNLLNFNPDNVLAQLEEVEKSDGFSSRLHYTYSYSTSKFQRKALSDLDDMNLAPKWEGIHSSKGAQDRRYRPTFSRNRHPDEERTYKDRTLNATAYKELINSYLKNINTKPTKEEMPISDQWKQFQDSRSVGKTKEIQISDTDYAEETSELDNLWREMEVSLASSYIEDTEDANAANLFDTQEKSKEACEHYFRLDDEIGICCKKCGFVEMDIKAITPAFLQHSVWHQEERQNDGKEDAESKAAEFEDFNLVSNVENEDEPVSVEHDNVWALIPDLRKKLHLHQKKAFEFLWRNIAGSTEPALMDKNSRKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKKPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFNQKQSMVFPGMPKPTEDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKYAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLLLARPKFAHEVLKVLDPKYKKKKGKVRAVEYRARKFFIEVISRKIDSNNGEERMQGLNMLRNLTNGFIDVYEGSSSDDLPGLQIYTLLMNTTDMQHEMLKRLHKKMQKCNGYPLELELLITLGSIHPWLIKTAVCANKFFTMEELRELEKCKFDLKMGSKVKFVMSLIYRVVQKEKILIFCHNIAPVKLFIEYFELFFKWQKGREILVLTGELELFERGRVMDKFEEPGGVSKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFSEEFVEDPSQWQAQKIEDEILREMVEEDKSKSFHMIMKNEKASTNNR* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0694 1382 CDD DEXHc_ATRX-like 804 1030 - -
Ahy7g0694 1382 CDD SF2_C_SNF 1175 1311 - -
Ahy7g0694 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1100 1363 IPR027417 -
Ahy7g0694 1382 SMART helicmild6 1215 1300 IPR001650 -
Ahy7g0694 1382 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 103 1379 - -
Ahy7g0694 1382 SMART ultradead3 800 1038 IPR014001 -
Ahy7g0694 1382 MobiDBLite consensus disorder prediction 354 375 - -
Ahy7g0694 1382 Gene3D - 772 1059 IPR038718 -
Ahy7g0694 1382 MobiDBLite consensus disorder prediction 587 607 - -
Ahy7g0694 1382 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 103 1379 IPR044567 GO:0080188
Ahy7g0694 1382 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 829 1029 IPR014001 -
Ahy7g0694 1382 Pfam Helicase conserved C-terminal domain 1183 1299 IPR001650 -
Ahy7g0694 1382 Pfam SNF2-related domain 809 1039 IPR000330 GO:0005524|GO:0140658
Ahy7g0694 1382 Gene3D - 1103 1382 IPR027417 -
Ahy7g0694 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 770 1031 IPR027417 -
Ahy7g0694 1382 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1186 1347 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0694 Ahy-Chr7 7877450 7883881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0694 1179 1318 RAD5 or RAD16-like Gene Family AT5G43530 32.168 1.48e-11 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy7g0694 SNF2_N 1.70E-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0694 K10875 - gmx:100811703 1751.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0866 17 9973489 9979886 Ahy7g0694 7 7877450 7883881 hybridization
Ahy20g1322 20 27438843 27444471 Ahy7g0694 7 7877450 7883881 PCT
Ahy7g0694 7 7877450 7883881 Ahy20g1322 20 27438843 27444471 PCT