Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0670 ATGGTTTCAAGAGAGCAAAAGAGAGCAGCACTACTGCATGAGAAGCTTCAACTCCTTCGTTCTGTTACCAACTCTCATGCTGTGAACAAAAGCTCCATCATAATCGATGCATCAAAGTATATTGAAGAGCTTAAAGAAAAGGTAGAAAGACTCAATCAAGAAATAGCCACAGCAGAAACTTCAAATCATCATCATCACCATAATCCTAATTTGCCTATGGTGACAGTAGAAACCCTAGAAAAGGGATTTATGATAAATGTAATTTCAGGAAGAAGCTGCCAAGGACTACTTGTTTCAATTCTTGAAGCCTTTGAAGACATGGGTCTCACCGTTCTTGAAGCTAGGGTTTCTTGTACGGACACTTTTCGATTCCAAGCAGTTGGAGGAGAAAATGATGAACAAGGTGACACTATTGATGCACAAGCTGTGAAACAAGCAGTGGGACAAGCAATAAAGAATTGGAGCCAACAAAGTGCTGATCAAGATTAA 489 0.3967 MVSREQKRAALLHEKLQLLRSVTNSHAVNKSSIIIDASKYIEELKEKVERLNQEIATAETSNHHHHHNPNLPMVTVETLEKGFMINVISGRSCQGLLVSILEAFEDMGLTVLEARVSCTDTFRFQAVGGENDEQGDTIDAQAVKQAVGQAIKNWSQQSADQD* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0670 162 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 160 - -
Ahy7g0670 162 CDD ACT_UUR-ACR-like 95 151 - -
Ahy7g0670 162 Gene3D - 2 71 IPR036638 GO:0046983
Ahy7g0670 162 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 67 IPR036638 GO:0046983
Ahy7g0670 162 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 160 - -
Ahy7g0670 162 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0670 Ahy-Chr7 7615736 7617626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0670 5 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.032 9.62e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0670 - - tcc:18600910 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0842 17 9725898 9727955 Ahy7g0670 7 7615736 7617626 hybridization
Ahy20g1270 20 25048165 25050837 Ahy7g0670 7 7615736 7617626 PCT
Ahy10g0934 10 16919482 16922122 Ahy7g0670 7 7615736 7617626 PCT
Ahy7g0670 7 7615736 7617626 Ahy20g1270 20 25048165 25050837 PCT
Ahy7g0670 7 7615736 7617626 Ahy10g0934 10 16919482 16922122 PCT