Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0598 ATGCAAGTAGCAGAACTCCAACAAAACCTGGTTCAACACCAACACAAAGAGAACAAGATCATGTGCAAGAAGATCCAGCTAAGTGTCTCTGACACTGAACTCCATAATCACCATCATAATTCATGTGGTTGTGATGTTGATGGGTGCCACAAGGTTGAGGGTGAGGATCTATTCATTCCACCCCTCAATTTTGCAATGGTTGATAATGGCATTTTCAGGTCTGGTTTCCCTGAACCTGCTAACTTCTCTTTCCTTCAGACCCTTGCTCTCCGCTCTATCATATATCTATGTCCTGAGCCATATCCAGAGGCTAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCAATTTGGAATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCAGAAGACACAATCCGTGAAGCATTAAAAGTTGTCCTTGATGTCAGGAACCATCCACTTATAATTCATTGTAAGCGGGGGAAGCACCGAACGGGGTGTTTAGTAGGATGCTATAGGAAGTTGCAGAAATGGTGTTTGTCTTCTGTGTTTGATGAATACCAACGCTTTGCAGCTGCAAAAGCAAGAGTTTCAGATCAGAGGTTGGATTGA 603 0.4295 MQVAELQQNLVQHQHKENKIMCKKIQLSVSDTELHNHHHNSCGCDVDGCHKVEGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLALRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPLIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRLD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0598 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 59 199 IPR029021 -
Ahy7g0598 200 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 11 199 - -
Ahy7g0598 200 Gene3D Protein tyrosine phosphatase superfamily 57 199 IPR029021 -
Ahy7g0598 200 CDD PFA-DSP_Siw14 57 198 - -
Ahy7g0598 200 Pfam Tyrosine phosphatase family 59 198 IPR004861 -
Ahy7g0598 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Ahy7g0598 200 PRINTS Plant and fungal dual specificity phosphatase signature 95 108 IPR020428 GO:0016791
Ahy7g0598 200 PRINTS Plant and fungal dual specificity phosphatase signature 131 145 IPR020428 GO:0016791
Ahy7g0598 200 PRINTS Plant and fungal dual specificity phosphatase signature 58 75 IPR020428 GO:0016791
Ahy7g0598 200 PRINTS Plant and fungal dual specificity phosphatase signature 114 128 IPR020428 GO:0016791
Ahy7g0598 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 200 IPR020422 GO:0006470|GO:0008138
Ahy7g0598 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0598 Ahy-Chr7 6280471 6286996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0598 54 199 Protein tyrosine phosphatase (PTP) family AT4G03960 77.397 4.10e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0598 K18045 - gmx:100814279 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0758 17 8263472 8270309 Ahy7g0598 7 6280471 6286996 hybridization