Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0579 ATGGTTATTGAGCTTGATGACATGCAATCTAAGGGTAAGATAAGGTGTACATTGTGGGAGGAGTTTGCTACTCAACTGGTGAAGCACATGGAGCAGTACCCTAATACTGAGTTCATTATTATTGTGCAGTTTGCCAAATTTAACCTGTTCAAGGGAACCATGGGCATATCTAATACAAACTACAACTCTACCTTATACATTAACGCTGATCTTAAAGAAGTTAAGGAATTTAGACAAAGGTTTATCATGGGTAATGACAAGCCATCTAACCAGCTTTCTCAAATTGCATCTGATTCATTGATTTCCCTTGAGCAATATCTTATTAACCATACTCCTTACAAGTCTATAAGCGAACTTAAGGAGAGCACTGAGGGTGGAATATTTGTTACCATTGGAACTGTGATTTCTATTGACACTAGACTAGGTTGGTGGTACAAAGGGTGCAAGATGTATTTTCATTCACTTAAAGAAGATGAGAATTCATATTATTGCCATGAATGTGATATTTATCCTAATACTCATGTTCCTCGTTTCTGCATTCAAATGAGAGTATCAGATGAGACAGACTCTGCTTCATTTATTGTTTATGACAAGGAAGCCTCCAAATTTCTTGAGATATCTGCTTCTGAGCTTCGTTTGAGACAGATATCAAAGGGTTGCGGCAAGGATGAATTTCCCGTTGAGATTAATTCATTTAGGGGTAAGAAGTTTCTATTCAAGATTTCTGTGAAGCTTGATGATATCAATGCTTTCCAGCCATGCAAGATTACTGTTTTGAAGTTGACTGAAGATCCAAATCTGCTCACTTCTTTTTCTTCCAAGTACAAGACATTTGATAACACCCCAATCGAAAATACTGAGTTGCAGAGTTTGCAAACTGATTCTACTGATAATTCTAAGGAGATTAGTTCACAGTCTTGCGAAATTATTTCTCTTGATGGCAATGATGACTTTGTAACTCCTAAGAGAGGTATGATAGCTGGTGTAACGGCAAAAAATTTGCTGGACATTTTCCCGGATAATGCCACTACTTCATCATCCAAATGCCGGAAGCTCTCCAAGGAGTCTGATTGTAGCTTTGTCAAAGAGCATGTTGATTAA 1101 0.3751 MVIELDDMQSKGKIRCTLWEEFATQLVKHMEQYPNTEFIIIVQFAKFNLFKGTMGISNTNYNSTLYINADLKEVKEFRQRFIMGNDKPSNQLSQIASDSLISLEQYLINHTPYKSISELKESTEGGIFVTIGTVISIDTRLGWWYKGCKMYFHSLKEDENSYYCHECDIYPNTHVPRFCIQMRVSDETDSASFIVYDKEASKFLEISASELRLRQISKGCGKDEFPVEINSFRGKKFLFKISVKLDDINAFQPCKITVLKLTEDPNLLTSFSSKYKTFDNTPIENTELQSLQTDSTDNSKEISSQSCEIISLDGNDDFVTPKRGMIAGVTAKNLLDIFPDNATTSSSKCRKLSKESDCSFVKEHVD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0579 366 Gene3D - 104 270 IPR012340 -
Ahy7g0579 366 Pfam Replication factor-A C terminal domain 129 262 IPR013955 -
Ahy7g0579 366 SUPERFAMILY Nucleic acid-binding proteins 111 264 IPR012340 -
Ahy7g0579 366 SUPERFAMILY Nucleic acid-binding proteins 10 81 IPR012340 -
Ahy7g0579 366 CDD RPA1_DBD_C 116 270 IPR013955 -
Ahy7g0579 366 PANTHER REPLICATION FACTOR A 1, RFA1 11 288 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy7g0579 366 CDD RPA1_DBD_B_like 1 82 - -
Ahy7g0579 366 PANTHER BNAC07G49340D PROTEIN 11 288 - -
Ahy7g0579 366 Gene3D - 1 91 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0579 Ahy-Chr7 6039380 6041243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0579 3 258 Core DNA Replication Machinery Family AT5G08020 23.507 8.46e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0579 - - adu:107490971 712.99