Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0556 ATGGAACACAATTTCATGTTTTCATTGTTGTTGTTGTTGCTGATTACTTTACCTTTGAGTGCAGAATCAAAGTGTAGCAAGAGCTGTGACTTAGCTTTAGCTTCTTACTATCTTTGGAACAATGATTCCAGCCTGCTATATATTTCACACATCATGCAATCCAATCTTCTTAACAAAGTTGAAGATATTGTTAGATACAACAAACACACCTCATATCCATCACATACCAGAGTTAATGTTCCAATCCCTTGTGATTGCATCAATGATGGAGAGTTTCTGGGCCACACATTCCAGTACTCAGTTACTCGAGGCGACGACTACTTAACCATTGCCAATGGGACTTTTTCCAACTTGGTCACAGCAGAGTGGCTGCAGAACATTAACAGCTATTCACAAGCTGCTATTCCGGCCGGTGGAAAGGTTAATGTGACAGTTAACTGTTCTTGTGGAGACAGTAATATTAGCAAAGATTATGGATTGTTCATCACATACCCTCTTAGGCCTGAGGATTCTTTGCAGTCAATTGCAAACCAGACAAAGCTTGATCCTGAGTTGTTGATGAAATACAACCCCGGTGTAAATTTCAGCAAAGGGAGTGGTCTAGTTTATATTCCTGGCAGAGATGAAAACGGCAACTATGCGCCTCTTCGCCCAAGAACAGGTCTACCAGGTAAGGTTGTTGCTGGAATATCTGTTGGAGTTGTAGCAGTAGTTCTGTTATTAGCATTTTGTGTTTGTATTAAATGTTGCGGAAGGAAGAAGAAAAAACTGAGAACAGAATATTTCGGTCAGAACACTACTCGAGCTAGGGAAGCGTCTGATAGCTTTGTAAGCACAAGTGTGGGAAAATCAGCAGAGTTTTCATATGAAGAACTGGCCCATGCCACAAATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGAGAAATCTATTATGCAGAGCTGAATGACAAGAAAGCTGCAATAAAGAAGATGGACATGAAAGCATCAAAAGAATTTCTTGCAGAACTGAAAGTGTTGACACATGTTCAGCACTTAAACCTGGTCCATTTGATTGGATATTGTGTTAAGGACTTCCTTTTCCTTGTGTATGAATATATTGACAATGGAAACCTAAGTGAACATCTACGAAATTCAGATAGAGAACCTTTGCCATGGTCTACTCGGATTCAAATAGCTCTGGATTCAGCCAGGGGACTTGAATATATTCATGAACATACAAAGCCTGTATATATCCATCGCGATATAAAGTCTTCCAATATATTATTAGACAAATCCTTCCATGGAAAGGTTGCGGATTTCGGACTAGCAAAGCTGATTGATACTGGAAGTTCATCAGCTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAGTATGTATATGGCAGAGTTTCTCCTAAATTAGATGTCTTTGCTTTTGGGGTTGTCCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAATGGTGGTGCTGAAATCAAGGGCCTTGTAGCTTTGTTTCATGAAGTTTTTGATCAACCAGACCCTAAAGAAGGTCTTAAAGAACTGGTGGATCCTAGGCTTGGAGAAAATTACTCAATTGATTCAGTTTTCAAGATGGCTCAACTAGCCAATGCATGTACAGAGAGGGATCCGAAGCTGCGTCCGAAGATGAGATCGGTGGTGGTTGCTCTTATGACACTTGGTTCAGGCACTGAGAATTGGGACATTGCTTCCTTCTATGAAAATCCAGCTCTTGTGAATCTAATGTCTGGTAGATAG 1785 0.4045 MEHNFMFSLLLLLLITLPLSAESKCSKSCDLALASYYLWNNDSSLLYISHIMQSNLLNKVEDIVRYNKHTSYPSHTRVNVPIPCDCINDGEFLGHTFQYSVTRGDDYLTIANGTFSNLVTAEWLQNINSYSQAAIPAGGKVNVTVNCSCGDSNISKDYGLFITYPLRPEDSLQSIANQTKLDPELLMKYNPGVNFSKGSGLVYIPGRDENGNYAPLRPRTGLPGKVVAGISVGVVAVVLLLAFCVCIKCCGRKKKKLRTEYFGQNTTRAREASDSFVSTSVGKSAEFSYEELAHATNNFSLANKIGQGGFGEIYYAELNDKKAAIKKMDMKASKEFLAELKVLTHVQHLNLVHLIGYCVKDFLFLVYEYIDNGNLSEHLRNSDREPLPWSTRIQIALDSARGLEYIHEHTKPVYIHRDIKSSNILLDKSFHGKVADFGLAKLIDTGSSSAPTANMAGTFGYMPPEYVYGRVSPKLDVFAFGVVLYELISAKEAVINGGAEIKGLVALFHEVFDQPDPKEGLKELVDPRLGENYSIDSVFKMAQLANACTERDPKLRPKMRSVVVALMTLGSGTENWDIASFYENPALVNLMSGR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0556 594 PANTHER LYSM RECEPTOR KINASE 1B 7 594 - -
Ahy7g0556 594 ProSiteProfiles Protein kinase domain profile. 299 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0556 594 Gene3D Transferase(Phosphotransferase) domain 1 370 580 - -
Ahy7g0556 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Ahy7g0556 594 CDD STKc_IRAK 305 563 - -
Ahy7g0556 594 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 594 IPR044812 GO:0019199|GO:0045087
Ahy7g0556 594 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Ahy7g0556 594 Pfam Protein tyrosine and serine/threonine kinase 301 564 IPR001245 GO:0004672|GO:0006468
Ahy7g0556 594 SMART serkin_6 299 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0556 594 SUPERFAMILY Protein kinase-like (PK-like) 276 566 IPR011009 -
Ahy7g0556 594 Gene3D Phosphorylase Kinase; domain 1 270 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0556 Ahy-Chr7 5786409 5790365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0556 11 594 Receptor kinase-like Gene Family AT3G21630 52.846 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy7g0556 PK_Tyr_Ser-Thr 8.00E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0556 - K13429 gmx:100803042 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0710 17 7578132 7582186 Ahy7g0556 7 5786409 5790365 hybridization