Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0470 ATGTCGATTGCAGCCCCAGGGCAACTGAACGTGAACGAATCCCCTTCTTGGGGATCCAGAAGTGTCGATTGCTTCGAGAAGTTAGAGCAAATTGGCGAGGGCACATACGGTCAAGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATTCGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTTAAGAAACTACACCATGAAAATGTGATCAAGCTAAAAGAAATTGTCACTTCTCCAGGCCCCGAGAAAGATGAACAAGGGAGGCCAGATGGTAACAAATATAAAGGGGGCATCTATATGGTCTTCGAATACATGGACCATGATTTGACTGGTCTTGCTGACCGTCCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTGTTGACGGGACTTCATTATTGTCATGTAAATCAAGTACTTCATCGAGATATTAAAGGCTCAAATCTCCTTATAGACAATGAAGGAAATCTGAAGCTTGCAGATTTCGGACTGGCACGGTCATTTTCTAATGATCACAATGCAAATCTTACAAACCGTGTCATTACATTATGGTACAGACCCCCTGAGTTGCTGCTAGGGACAACAAAGTATGGGCCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTCGCCGAACTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCTGAACAACTAAATAAAATATTTGAGCTGTGTGGAGCACCGGATGAGGTGAACTGGCCTGGGGTTTCCAAGACTCCTTGGTATAATCAATTTAAACCAACAAGGCCAATGAAAAGACGTCTGAGGGAAGTTTTCAGACATTTTGATCGTCATGCTCTGGAATTATTGGAGAGGATGCTGACACTTGATCCAGCTCAGAGAATTACCGCGAAGGATGCTCTTGATGCTGAGTATTTCTGGACTGATCCGTTGCCATGTGACCCCAAGAGTTTACCCAAGTATGAATCATCACATGAGTTTCAGACAAAGAAAAAGCGTCAGCAACAACGGCAAAATGAAGAAATGGCTAAGCGCCAGAAAATGCAGCATCCTCAGCAGCATACTCGTCTTCCCCCCATTCAGCAGCCAGGGCAACATGCACAAATGCGATCAGGACCTAACCAAAATTTACATGGTTCTCAACCCCAAGTTGCTGCGGGACCTAGTCACCATTATGGGAAGCCTCGAGGTCCATCTGGTGGGCCAGGAAGATATCCACCAAGCGGGAACCCTGGTGGAGGATACAATCACCCTAATCGGGGAGGTCAAGGAGGGGGTGGCTATGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGGGGCACCTTATGGTTCCAGCGGCATGCCTGGTGGTGGTCCTCGCGGAGGAGGTGGTAGTGGCTATGGAGTCGGAGCCCCAACTTATCCCCAGCAAGGGGGTCCATATGGTGGGTCTGGCACTGGTCGTGGCTCAAACATGATGGGTGGAAACCGCAATCAACAATACGGATGGCAGCAATGA 1551 0.4707 MSIAAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQPGQHAQMRSGPNQNLHGSQPQVAAGPSHHYGKPRGPSGGPGRYPPSGNPGGGYNHPNRGGQGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGGGSGYGVGAPTYPQQGGPYGGSGTGRGSNMMGGNRNQQYGWQQ* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0470 516 MobiDBLite consensus disorder prediction 370 401 - -
Ahy7g0470 516 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Ahy7g0470 516 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Ahy7g0470 516 MobiDBLite consensus disorder prediction 335 516 - -
Ahy7g0470 516 CDD STKc_CDK9_like 25 324 - -
Ahy7g0470 516 MobiDBLite consensus disorder prediction 337 366 - -
Ahy7g0470 516 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Ahy7g0470 516 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0470 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Ahy7g0470 516 MobiDBLite consensus disorder prediction 490 516 - -
Ahy7g0470 516 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0470 516 PANTHER CELL DIVISION PROTEIN KINASE 5 453 - -
Ahy7g0470 516 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 453 - -
Ahy7g0470 516 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0470 516 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0470 Ahy-Chr7 4543650 4548153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0470 1 516 Core Cell Cycle Gene Families AT5G10270 78.736 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy7g0470 Pkinase 2.90E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0470 K08819 - gmx:100793565 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0609 17 6195774 6200276 Ahy7g0470 7 4543650 4548153 hybridization
Ahy7g0470 7 4543650 4548153 Ahy17g0609 17 6195774 6200276 PCT
Ahy7g0470 7 4543650 4548153 Ahy7g0470 7 4543650 4548153 PCT
Ahy17g0609 17 6195774 6200276 Ahy7g0470 7 4543650 4548153 PCT