Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0424 ATGTCTGCTCTTCTCAACAACGATCTTAACGAACTTTCCCTCAAGCCCCAGATTCAGAGTGAAACAGGAAGTGAATGTGAAGAGGAGATTCGTGGGGTGGAAGGAGGTGGCGGGAACCATGTTCATCGTGAAGGTCTGTGCGCCATTTGCTTGGACAAGATTCTGCTTCAGGATACTGCTCTTGTAAAAGGTTGCGAGCATGCATACTGCGTGACGTGCATCCTTCGCTGGGCTACTTACAGAGAGAGAGTTACCTGCCCTCAGTGTAAACATCCATTCGACTTCCTCTTTGTCCATCGCTCGCTTGATGGCAGCATCCAGGACTACATGTTCGAGGAGAGTGTTTGCCTACTACTTAGGGCTGCATGGTTTCAACCTCTGAAGGTCGAAAATCACGTGGAGCATGAAGATGCCTACGATCCTATTGAAGATTTTTATCAATATCAATATGATTATGAGTATGATGACGAGGATGATGATGATCTAGATGAAGTTTACTATGGTAGCTCATCAAGTCTTCGCATTGGTAACCGGAGATGGGGAGACAATGGTTATGTCAGATCTGGGCGGCTCGAAGCAAGGCCAGTCCCGCGATCAAACTTCCAGGATCCAGGAGGCGCAAGTTCATCATCTCGCCAGCCAAAAAAGAAAGAGGCAGCTGAAAAAGTCGCAACAGGTAGACGGGCTAAAAGGGCATTGAAGCGGGAGGCTGCTGATAAGGCAGCAGCGGCAAAGCATCAGCAGCATCTAGTGAGGTTGGGCAGGAAGTAG 771 0.4864 MSALLNNDLNELSLKPQIQSETGSECEEEIRGVEGGGGNHVHREGLCAICLDKILLQDTALVKGCEHAYCVTCILRWATYRERVTCPQCKHPFDFLFVHRSLDGSIQDYMFEESVCLLLRAAWFQPLKVENHVEHEDAYDPIEDFYQYQYDYEYDDEDDDDLDEVYYGSSSSLRIGNRRWGDNGYVRSGRLEARPVPRSNFQDPGGASSSSRQPKKKEAAEKVATGRRAKRALKREAADKAAAAKHQQHLVRLGRK* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0424 256 SMART ring_2 47 89 IPR001841 -
Ahy7g0424 256 ProSiteProfiles Zinc finger RING-type profile. 47 90 IPR001841 -
Ahy7g0424 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 113 IPR013083 -
Ahy7g0424 256 SUPERFAMILY RING/U-box 46 97 - -
Ahy7g0424 256 MobiDBLite consensus disorder prediction 191 256 - -
Ahy7g0424 256 MobiDBLite consensus disorder prediction 214 246 - -
Ahy7g0424 256 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 256 - -
Ahy7g0424 256 Pfam Ring finger domain 47 90 IPR001841 -
Ahy7g0424 256 ProSitePatterns Zinc finger RING-type signature. 65 74 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0424 Ahy-Chr7 3761112 3763465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0424 18 256 C3H Transcription Factor Family AT5G19430 58.130 3.10e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0424 - - gmx:100777135 305.064