Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0423 ATGTGGCCTTCCAGGTCCCTCAACTACGGCCTCGCACCTCCCGACATGCCTCCAGGAATGGTTGGACTCCGCGACGTCTTCGTCGTCGCTCCGGCCTCCTCCTTCCACCACCACCACCACCACCACAACGATGCCGTCTTGTCCTCCTCCGATCTTCACCATCTCAGCAACAATTCCTCCAACAATCCCGCAACTGCACTCGGCGTTGGAGTTGGAGTCGGTGTCATCCCTCTCCTCACCGCAACGCCGTGTCTCGATCAGGAAAATATTCTCACCGGAAGAACCAGAACCGCCGCCTCTGGAGGTACTACCGGCGGCGGAATTCAATTCTGGCAGGAACAACAACCGCATCATCATCAGTACCTGAAGAAGCAGGGTTTTATAGACCACAATATCGGAGCCAATTTGGTTCCCGGTGGAGGCAGCGGAAGCGGCAGCGGCGATGGCGGTGCTTCCAACAGTGGCGGTGGAACAACCACGTGTCAAGATTGCGGGAACCAAGCGAAGAAGGATTGTGCACATAGGAGGTGCAGAACTTGCTGCAAGAGTAGGGGTTTTGATTGCCCTACTCACGTGAAGAGCACGTGGGTTCCAGCTGCGCGCCGGAGGGAGCGCCAGCTCATCACTGGCACGACTCCGTCGACGGCCGCTGCGGTTGCCGGTTCTAGCGGTTCAACTTCCGGCGCCAAGAAACCTCGGTTGATTTCTTCACAGACAACAACAAATTCTCACACTTCAACTTCCAACACCACTCCTCCTAGAAGCTTCGACACTTCTTCTAGCCATCAAGATGCGAGTTTCAAGGAGAAATTGCCTGGTCAAATAAGAGCACCAGCAGTGTTCAAGTGTGTGAGAGTCACGTCAGTGGACGATGAACAAGATGAGTATGCATATCAAGCCGTTGTGAAGATCGGTGGCCGTGTCTTCAAAGGCTTTCTCTATGATCAAGGCCATCAGAATCATAGTAATAGAGATAGCAATAATAGTAATAATAATGTGTATCCTAATCTTTCTGAGCTCCATTTAGGTGGTGGCGGCGGTGGTGGCAGCGGCGGTGGTGGTAGAAATGGGGTTTCATCATCCTCCCCAATGCTTGATCCTTCTGATGTTTATGCAGCTTCAGGTGGTGGTGGTGGTGGTGTTGGGGGGTTACTGGGAGGTTCAACCTATGGTAATCCAATAAATTGA 1188 0.5295 MWPSRSLNYGLAPPDMPPGMVGLRDVFVVAPASSFHHHHHHHNDAVLSSSDLHHLSNNSSNNPATALGVGVGVGVIPLLTATPCLDQENILTGRTRTAASGGTTGGGIQFWQEQQPHHHQYLKKQGFIDHNIGANLVPGGGSGSGSGDGGASNSGGGTTTCQDCGNQAKKDCAHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLITGTTPSTAAAVAGSSGSTSGAKKPRLISSQTTTNSHTSTSNTTPPRSFDTSSSHQDASFKEKLPGQIRAPAVFKCVRVTSVDDEQDEYAYQAVVKIGGRVFKGFLYDQGHQNHSNRDSNNSNNNVYPNLSELHLGGGGGGGSGGGGRNGVSSSSPMLDPSDVYAASGGGGGGVGGLLGGSTYGNPIN* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0423 395 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 20 395 IPR007818 GO:0003700|GO:0006355
Ahy7g0423 395 MobiDBLite consensus disorder prediction 207 271 - -
Ahy7g0423 395 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 160 202 IPR006510 -
Ahy7g0423 395 MobiDBLite consensus disorder prediction 319 372 - -
Ahy7g0423 395 MobiDBLite consensus disorder prediction 136 157 - -
Ahy7g0423 395 MobiDBLite consensus disorder prediction 207 267 - -
Ahy7g0423 395 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 20 395 - -
Ahy7g0423 395 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 271 317 IPR006511 -
Ahy7g0423 395 MobiDBLite consensus disorder prediction 319 337 - -
Ahy7g0423 395 Pfam Domain of unknown function (DUF702) 158 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0423 Ahy-Chr7 3750027 3752987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0423 2 370 C2H2 Transcription Factor Family AT5G12330 48.031 1.27e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy7g0423 DUF702 1.00E-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0585 17 5709477 5711528 Ahy7g0423 7 3750027 3752987 hybridization