Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0410 ATGGCTTTCTTTAGGAATTTTCTAAATGATAATGTCTCCCATAGCGTCATTGAAGATAAAGACCAAGAACAGAATGCTGATAGAGTACATAGATCAGTAGGTAATGAGTGTGTGGATGCAACGTCTGGTGAGAAGGAATTTGATATGAACATGGAGGCACAATACCAGAGTGATGGTGAGCCAGATGGGGCTAATGGAATGCAAAATGAAGCAACAACTGATGATGGAGTTGGTGAGAGAGAATCAAACTTAGAGACTACTGGTAGTAAAACAGCTATGGTTGGAGAGTGGGGTTCAACATTTTTTCAGGACTGCCGGCCTATGTGCCCTCAGGATGGTTCTGACTCTGGGCAGGAATCGAAAAGTGGATCAGAATATAGAAATGAAGATGTCTCTGAAGAAAATTCGTTTGATGGAAGAGGGGACAGATTAGACTCAGAGGATGATGAAGGACAAAATGAAGCAGGAAAAGCTCCAAGAGGCCAGTCTGATGTTCCTGCTGAGGAGATGTTGTCTGATGAATACTATGAGCAGGATGGGGAGGAGCAGAGTGATTCGCTGCATTACAAGGGGGCACATAAAGCAAGCGGGTTGAATTCATGGCCTCATCGGATGTCCAACAATGCCAACAGCACTGGGCGTAGGAGGTCTAGAATTGTAGATGATGGCGAAGATGATGATGGTGATAATGATGATGACGACGGTGATGCTGATTATGAGGAGGAGGATGAAGGAGATGAAGATGACCCGGATGATGCAGACTTTGAGCCTGCAGCAGGTGGTCGTGCTGCAAACAAGGATAAAGATTGGGAAGGTGAAGGCTCTGATGAAGATGATGACAGTGATGTAAATCTAGATGTTTCAGACGATGATGATGACGACGACGATGACGATTCTTACTATGCCAAAAAACCCAAGGCAAGGCAAAGAGGTAAAGTTGGACGAAGCATAAAGTCTAGTAGAGATCGCAAAACATATGCTTCGTCTGGTCGACAGAGAAGAGTTAAATCTTTTGAAGATGAGGAATCAACAGCAGATGATTCTGACAGTGATAGTGATGAGGATTTCAAGAGCGTAAAGAAGAGAGGAGCTCATGTCCGCAAGAATAATGGTCGCTCTTCTGCAGCCAGTAGTTTATCTTTGCGCAACAGTGAGGTTCGCACGTCTAGTAGATCAGTTCGGAAGGTATCATATGTTGAAAGCGAAGAAAGTGAAGAAGCTGATGAAGGGAAGAAGAAAAAGTCACAGAAGAATATTTTTCAGGAAGAGATTGAAGAGGATGATGGTGACTCTATTGAAAAAGTGCTTTGGCATCAGCCGAAGGGCATGGCTGAAGATGCTCAAAGGAATAATAGATCAACAGAGCCTGTTTTGATGAATCACTTGTTTGAGTCTGAAATTGATTGGAGCGAGATGGAATTCTTGATAAAATGGAAGGGCCAGTCGCATTTGCACTGTCAGTGGAAGTCTTTTGCTGAGCTGCAAAATCTTAGTGGTTTCAAGAAGGTTTTGAATTATACTAAGAAGATAATGGAGGACATTAGATACAGGAAGACAATCTCAAGAGAGGAGATTGAAGTCAATGACGTGAGTAAGGAGATGGATTTAGATATTATTAAACAAAACAGTCAGGTGGAAAGAATAATTTCAGATAGGATCATTAAAGATAATGGTGGCAATGTTATTCCTGAATACTTGGTCAAGTGGCAAGGATTATCCTATGCTGAAGCGACCTGGGAAAAGGACACTGATATTGCTTTTGCTCAACATGCTATTGATGAGTATAAGGCTCGTGAAGCTGCAATGTCTGTTCAAGGAAAGACGGTAGATTCCCAGCGCAAGAAGAGCAAATTAAGTCTGCGGAAGCTTGAGGAACAACCTGAATGGTTGAGGGGTGGAAAGCTCCGTGATTATCAGCTTGAGGGTCTGAATTTTCTTGTTAACAGTTGGAGAAATGATACGAATGTCATTTTAGCTGATGAAATGGGTCTTGGTAAAACTGTTCAGTCAGTTTCAATGCTTGGTTTTCTACAGAATGCCCAGCAAATCCATGGCCCTTTTCTTGTAGTTGTACCACTGTCTACTTTATCAAACTGGGCCAAAGAATTCAGGAAGTGGCTTCCTGATATGAATATCATTATATATGTTGGAACTCGTGCAAGTCGAGAGGTTTGTCAACAATATGAATTTTACAATGATAAAAAGCCTGGAAAACCTATTAAGTTCAATGCGCTGTTGACTACATATGAAGTAGTTTTGAAAGACAAGGCTGTTCTCTCCAAGATCAGATGGAGTTATCTGATGGTAGATGAGGCTCATAGACTAAAAAATAGTGAGGCGCAGCTATATACAACACTTTCAGAATTTAGCACCAAGAACAAGTTACTTATCACTGGAACTCCTCTACAGAACAGTGTTGAAGAGCTATGGGCTTTGCTGCACTTCCTTGATCCTGACAAGTTCAGTAGCAAGGATGATTTCGTACAGAACTATAAGAATCTGAGTTCTTTCAATGAAAATGAGCTTGCAAATCTTCATATGGAATTGAGGCCTCACATACTGCGAAGAGTTATCAAAGATGTCGAGAAATCGTTACCCCCTAAAATTGAACGTATCCTTAGGGTTGAAATGTCTCCCCTTCAGAAACAGTATTATAAGTGGATTTTGGAGCGCAATTTTCATGATTTGAACAAAGGAGTTCGCGGGAATCAGGTTTCCCTTCTAAATATTGTAGTGGAATTAAAGAAATGCTGTAACCATCCCTTCCTGTTTGAAAGTGCTGACCATGGCTATGGTGGGGACTCTGGAAGTAGTGACAACAGTAAGCGAGAGAGAATTGTCTTTAGCAGTGGCAAGCTTGTTATACTTGACAAGCTACTTGTCAGATTGCATGAAACCAAGCATCGTGTTCTGATTTTCTCTCAGATGGTCAGGATGTTGGATATACTGGCAGAGTATATGTCGTTACGCGGGTTTCAATTTCAGAGACTTGATGGCAGTACAAAAGCTGAGCTTCGTCAGCAGGCAATGGATCACTTTAATGCACCTGGAAGTGAGGATTTTTGTTTCCTCCTTTCAACACGCGCAGGAGGTCTGGGTATCAACCTTGCAACTGCAGATACTGTCATTATATTTGATTCAGATTGGAACCCTCAAAATGATCTGCAGGCAATGAGTAGAGCTCATAGAATTGGCCAACAAGAAGTTGTGAACATATATAGATTTGTGACAAGCAAAAGTGTTGAGGAGGATATTTTGGAACGTGCCAAAAAGAAGATGGTTCTTGACCACTTGGTCATACAAAAATTAAATGCAGAGGGTAGACTGGAGAAGAAAGAAGCAAAAAAAGGAGGATGCTTTTTTGACAAAAATGAGCTATCCAAAATATTACGATTTGGAGCAGAGGAGCTTTTTAAGGAAGAAAGAAATGATGAAGAAAGCAAAAAACGACTCTTAAGTTTGGATATAGATGAGATTCTTGAAAGAGCAGAGAAGGTTGAAGAGAAGGAAGCTGAGGGAGAACAAGGAAATGAGTTATTAAGTGCATTTAAGGTGGCCAATTTTTGTAATGATGAAGATGATGAAAGCTTTTGGAGTCGTTGGATTAAGCCCGATGCTATAGTCCAAGCAGAGGATGCTCTTGCTCCGCGTTCTGCAAGGAATATTAAAAGCTATGCAGAGGATAATCAATCTGAAAGAAGTAATAAAAGAAAAAAGAAGGATCCTGAACCACCTGAACGAGCTCAGAAACGCCGGAAAGCAGAGTACTCAGCTCCTGCAGTACCAATGATTGATGGAGCATCTGCCCAAGTGAGAAATTGGTCATATGGGAATTTATCTAAAAGAGATGCACTCCGTTTTTCTCGTTCAGTTATGAAATATGGGAATGAGAGCCAAATTGACTTGATTGTTGCTGAGGTTGGTGGTGCACTTGGAGCTGCTTCACTTGAAGCACAGTGTGAACTCTTCAATGCTCTAATTGATGGCTGTACAGAGGCAGCAGAACTTGGCAGTCTGGATCCAAAGGGGCCTTTGCTGGATTTTTTCGGTGTCCCAGTGAAGGCGAATGATCTACTTGCCCGTGTCCAGCAACTTCAACTCCTAGCAAAGCGTATTAGTCGGTATGAAGATCCCATTCAACAGTTCCGTATTTTATCATATCTCAAGCCTTCAAACTGGTCGAAAGGTTGTGGATGGAACCAAAGTATGTCTATCCTCTGTAGTTTGTATTGTGCATTCCAATGGGTTACTTGTTTGTTGCTTTTGTTGACTCTATCTTGTTCATGGACAGTTGATGATGCAAGATTGCTTCTTGGAATACATTTTCATGGATTTGGTAATTGGGAAAAGATTAGATTAGATGAACGGCTTGGTCTTAACAAAAAAATTGCACCAGCAGAACTCCAACACCATGAAACTTTCTTGCCACGAGCTCCAAATTTGAGAGATCGCGCAAATGCCCTTTTGGAGCAGGAACTTGCTGTTCTTGGTGTGAAAAATGCTAATACCAGGGCTGGACGGAAACCTTCCAAGAAAGAAAGAGAACATATGATGAACAACACGCCACTGTTGCGTGGGCAGGAGAAGAAGAAAATGGGTTCTGCTAAAGTCAATGTCCCAATGAGAAAGGATAGACCTCAGAGACCGCAGAAGGTTGAACCTATAGTAAAAGAGGAGGGCGAAATGTCAGATGATGAGGAAGTATATGAGCAGTTCAAGGAAGTAAAGTGGATGGAATGGTGTCAAGATGTGATGGTTGAAGAAATGAAAACTTTGAAACGGCTTCACAGGTTGCAGACAACCAGTGCAAATCTTCCAAAGGAAAAGGTGCTTTCAAAAATACGTAACTATTTACAACAACTTGGGCGAAGGATAGATGAAATTGTCATTGATCATGAAGAAGAGCCATATAAGCAAGATAGAATGACTGTTCGGCTGTGGAAATATGTCTCCACCTTTTCCCATCTTTCAGGGGAGAGGCTTCATCAAATATATTCCAAACTTAAACAGGAGCAACAAGATGAGGCAGGGGTTGGCCCCTCAAATGCCAATGGTTCAGCATCTCTTTCATTTGGCAGAAATGGAAACCCATTTGCTCACCAACTGGAGAGGCCAAGAAGATTCAAAAATGTTACAACCTACCAAATGCCAGAACCAGTTAATAGTACAGGGAAATCTGAGGCATGGAAACGAAGAAGAAGAGCTGAAAGTGAGGACCATTTCCAGGGTCAGCCACCACCTCAAAGAACCATGAGCAACGGTATTCGTGTCACTGATCCTAGTGCACTTGGTATCCTTGGTGCTGGACCATCTGACAAACGTTTTGCCGGTGAGAAACCATTTAGGGCACAACCTGGTGGGGGCTTTCCTTCAAGGCAAGGCTTCTCTTCAGGTATAAAGTAG 5403 0.4192 MAFFRNFLNDNVSHSVIEDKDQEQNADRVHRSVGNECVDATSGEKEFDMNMEAQYQSDGEPDGANGMQNEATTDDGVGERESNLETTGSKTAMVGEWGSTFFQDCRPMCPQDGSDSGQESKSGSEYRNEDVSEENSFDGRGDRLDSEDDEGQNEAGKAPRGQSDVPAEEMLSDEYYEQDGEEQSDSLHYKGAHKASGLNSWPHRMSNNANSTGRRRSRIVDDGEDDDGDNDDDDGDADYEEEDEGDEDDPDDADFEPAAGGRAANKDKDWEGEGSDEDDDSDVNLDVSDDDDDDDDDDSYYAKKPKARQRGKVGRSIKSSRDRKTYASSGRQRRVKSFEDEESTADDSDSDSDEDFKSVKKRGAHVRKNNGRSSAASSLSLRNSEVRTSSRSVRKVSYVESEESEEADEGKKKKSQKNIFQEEIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMNHLFESEIDWSEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRKTISREEIEVNDVSKEMDLDIIKQNSQVERIISDRIIKDNGGNVIPEYLVKWQGLSYAEATWEKDTDIAFAQHAIDEYKAREAAMSVQGKTVDSQRKKSKLSLRKLEEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWSYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFSSKDDFVQNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKRERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGCFFDKNELSKILRFGAEELFKEERNDEESKKRLLSLDIDEILERAEKVEEKEAEGEQGNELLSAFKVANFCNDEDDESFWSRWIKPDAIVQAEDALAPRSARNIKSYAEDNQSERSNKRKKKDPEPPERAQKRRKAEYSAPAVPMIDGASAQVRNWSYGNLSKRDALRFSRSVMKYGNESQIDLIVAEVGGALGAASLEAQCELFNALIDGCTEAAELGSLDPKGPLLDFFGVPVKANDLLARVQQLQLLAKRISRYEDPIQQFRILSYLKPSNWSKGCGWNQSMSILCSLYCAFQWVTCLLLLLTLSCSWTVDDARLLLGIHFHGFGNWEKIRLDERLGLNKKIAPAELQHHETFLPRAPNLRDRANALLEQELAVLGVKNANTRAGRKPSKKEREHMMNNTPLLRGQEKKKMGSAKVNVPMRKDRPQRPQKVEPIVKEEGEMSDDEEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQTTSANLPKEKVLSKIRNYLQQLGRRIDEIVIDHEEEPYKQDRMTVRLWKYVSTFSHLSGERLHQIYSKLKQEQQDEAGVGPSNANGSASLSFGRNGNPFAHQLERPRRFKNVTTYQMPEPVNSTGKSEAWKRRRRAESEDHFQGQPPPQRTMSNGIRVTDPSALGILGAGPSDKRFAGEKPFRAQPGGGFPSRQGFSSGIK* 1801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0410 1800 Gene3D - 418 542 - -
Ahy7g0410 1800 SUPERFAMILY Chromo domain-like 427 510 IPR016197 -
Ahy7g0410 1800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 859 1139 IPR027417 -
Ahy7g0410 1800 ProSiteProfiles Chromo and chromo shadow domain profile. 430 518 IPR000953 -
Ahy7g0410 1800 SMART helicmild6 981 1065 IPR001650 -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1743 1757 - -
Ahy7g0410 1800 SUPERFAMILY Chromo domain-like 522 598 IPR016197 -
Ahy7g0410 1800 CDD CD1_tandem 428 508 - -
Ahy7g0410 1800 Gene3D - 545 597 - -
Ahy7g0410 1800 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 647 819 IPR014001 -
Ahy7g0410 1800 Gene3D - 626 865 IPR038718 -
Ahy7g0410 1800 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 955 1106 IPR001650 -
Ahy7g0410 1800 Coils Coil 1149 1169 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 396 417 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 122 155 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1725 1740 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 200 214 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1671 1800 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1528 1550 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1529 1550 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 52 417 - -
Ahy7g0410 1800 Gene3D - 866 1096 IPR027417 -
Ahy7g0410 1800 SMART chromo_7 428 511 IPR000953 -
Ahy7g0410 1800 SMART chromo_7 541 600 IPR000953 -
Ahy7g0410 1800 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 112 1710 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 82 96 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 370 395 - -
Ahy7g0410 1800 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 765 774 IPR002464 -
Ahy7g0410 1800 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 112 1710 - -
Ahy7g0410 1800 ProSiteProfiles Chromo and chromo shadow domain profile. 543 607 IPR000953 -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1226 1254 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 224 254 - -
Ahy7g0410 1800 Coils Coil 1095 1115 - -
Ahy7g0410 1800 CDD SF2_C_SNF 941 1076 - -
Ahy7g0410 1800 Pfam SNF2-related domain 654 923 IPR000330 GO:0005524|GO:0140658
Ahy7g0410 1800 Gene3D - 1422 1501 - -
Ahy7g0410 1800 Pfam Domain of unknown function (DUF4208) 1575 1667 IPR025260 -
Ahy7g0410 1800 SMART DUF4208_2 1563 1668 IPR025260 -
Ahy7g0410 1800 Pfam Chromo (CHRromatin Organisation MOdifier) domain 544 598 IPR023780 -
Ahy7g0410 1800 Pfam Helicase conserved C-terminal domain 952 1065 IPR001650 -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 315 341 - -
Ahy7g0410 1800 CDD CD2_tandem 541 597 - -
Ahy7g0410 1800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 856 IPR027417 -
Ahy7g0410 1800 SMART ultradead3 631 830 IPR014001 -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1219 1257 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 272 298 - -
Ahy7g0410 1800 MobiDBLite consensus disorder prediction 1675 1695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0410 Ahy-Chr7 3531587 3546278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0410 657 1092 RAD5 or RAD16-like Gene Family AT1G02670 25.984 8.64e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy7g0410 SNF2_N 2.50E-64 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0410 K11367 - gmx:100808039 2831.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0572 17 5531644 5547906 Ahy7g0410 7 3531587 3546278 hybridization