Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0407 ATGTTAACCACAATCCTCAGAAGAACTTCTTCTTCTGCTATCACGAAGCGCGCTCTCGCCGCCGCCGTAACCTCCACTACCGACCCCTTTCTCCACCGACTCACCTCTTCCTCCGCCGCCTCCGGAGATTCACCCGTCGGCGAGCTGCGACGATTCTCCGGGTTAACTGGTTTTTTGAAAGGGAGAGCCTTTCACTCTAATTCAGGGCCATTGAATTTCCGCTCCTCGTTCTGTTCTCGCGCGGAGTTTGCAGTTGAGGATTACGCCTACGAAGAAGGGTCTAGAGGGAACAGCGCCGATGAAGGTCTTGAGATCGCGAAGCTTGGGATTTCGCAGGATATTGTTTCTGCTCTTGCAAAGAAAGGAATCTTCAAGCTCTTTCCTATTCAGAAAGCTGTGCTGGAACCTGCTATGCAAGGACGTGATATGATTGGTCGAGCAAGAACAGGAACTGGAAAGACTCTTGCGTTTGGGATACCAATCATAGATAAGATCATTCATTTCAATGCTAAGCATGGGCGAGGAAGGAATCCCTTGGCTTTGGTTTTGGCTCCTACCAGAGAGCTTGCACGACAGGTTGAGAAGGAATTCCAGGAAGCAGCACCTAACTTGGATACCATCTGTGTTTACGGGGGTACACCCATCTCTCGTCAGATGAGGCAGCTTGATTACGGTGTTGATATTGCTGTAGGCACGCCTGGCCGAATCATCGACCTTCTAAACAGAGGTGCCCTGAATTTACAGGAAGTTCAGTATGTTGTTCTCGATGAAGCTGATCAGATGCTTCAAGTTGGCTTTCAAGAAGATGTCGAAAAGATCTTGGAGAGGTTGCCCCCTAAACGTCAGACTCTTATGTTCTCTGCAACAATGCCTTCTTGGATAAAGCAGATTACTCGTAACTACCTACAGGATCCCCTGACCATTGATCTTGTTGGAGAATCTGATCAGAAGTTGGCAGATGGAATTTCGCTATATTCTATTGGAACTGATATGTATGTTAAAGCAGGAATTCTCGGACCTCTAATAACAGAACATGCAAAAGGAGGAAAATGCATTGTTTTCACACAAACCAAACGTGACGCCGATCGATTAACATATGGCTTGGCAAAAACTGTTCAATGTGAGGCCTTGCATGGAGACATATCCCAAGCTCAGAGGGAAAGAACTCTGGCTGGATTCAGAAATGGACATTTTAACGTTTTGGTTGCAACAGATGTTGCTTCACGTGGGCTTGATATACCAAATGTGGATCTTGTAATACAGTTTGATCTTCCCAATTCATCGGAGATATTTGTTCATCGATCTGGACGAACAGGTCGTGCTGGTAAGAAAGGAACTGCTATTCTTGTTTATACAGAAGATCAGTCCAGGGCTGTTAAGACCATTGAGCGTGATGTGGGATGTAGATTTTTAGAGCTACCAAGGATTGCTGTTGATCCTGGATCAGTGGACATGGGTGGTGGACGATTCGGTTCTTATGGAGGTGGAAGGGATCGTCGATCTGGTGATTCAGGTTTTGGTCGTAGTCCTGGATTTGGTCGTTCAGGCGGCTATGGAAACTCTGGGTTTGGCCGCTCTAGCTATGGGAATTCTGGGTCAACTTCTAGTCGTTTTGGTGACTCTGGTATGAGTCGACCCAGGGGGGATTTTCAGGTGATTCATCTGGGGGATCAGGCTTTGGTCGGTTTGGCTCCTCTGATGGCTTTGGTTCAGGTCAATCGGGGAGTAGATCCGGAGGATTCAGTCGTCCAGGGGGTTTTGGTGGTTCAGATCGTTCAGGTGGTGGTGGTTTTGGGGGATTTGGTGGTTCAGATCGTTCAGGTGGTTTTGGAGGTTTTGGCTCAAGTCAATCTAGTGCCTTTGGTGTTGCTGATCAGAACAATAAGGGAAGATTCTAACTTCATAAATGCTATCAGGGCACCACCACCTTTGCTTCATGGTGGTTTAGTTTTGGATTCTATTTACTGTCATTTTCTTGGAAACTTAAGGCATTTAGGCAAATGA 2004 0.4681 MLTTILRRTSSSAITKRALAAAVTSTTDPFLHRLTSSSAASGDSPVGELRRFSGLTGFLKGRAFHSNSGPLNFRSSFCSRAEFAVEDYAYEEGSRGNSADEGLEIAKLGISQDIVSALAKKGIFKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIIDKIIHFNAKHGRGRNPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGALNLQEVQYVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQITRNYLQDPLTIDLVGESDQKLADGISLYSIGTDMYVKAGILGPLITEHAKGGKCIVFTQTKRDADRLTYGLAKTVQCEALHGDISQAQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIQFDLPNSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKTIERDVGCRFLELPRIAVDPGSVDMGGGRFGSYGGGRDRRSGDSGFGRSPGFGRSGGYGNSGFGRSSYGNSGSTSSRFGDSGMSRPRGDFQVIHLGDQALVGLAPLMALVQVNRGVDPEDSVVQGVLVVQIVQVVVVLGDLVVQIVQVVLEVLAQVNLVPLVLLIRTIREDSNFINAIRAPPPLLHGGLVLDSIYCHFLGNLRHLGK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0407 667 Gene3D - 104 312 IPR027417 -
Ahy7g0407 667 CDD SF2_C_DEAD 334 451 - -
Ahy7g0407 667 Pfam DEAD/DEAH box helicase 127 296 IPR011545 GO:0003676|GO:0005524
Ahy7g0407 667 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-LIKE 53 532 - -
Ahy7g0407 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 462 IPR027417 -
Ahy7g0407 667 Pfam Helicase conserved C-terminal domain 340 442 IPR001650 -
Ahy7g0407 667 Gene3D - 332 478 IPR027417 -
Ahy7g0407 667 SMART helicmild6 362 442 IPR001650 -
Ahy7g0407 667 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 134 308 IPR014001 -
Ahy7g0407 667 SMART ultradead3 122 325 IPR014001 -
Ahy7g0407 667 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 337 486 IPR001650 -
Ahy7g0407 667 MobiDBLite consensus disorder prediction 520 541 - -
Ahy7g0407 667 MobiDBLite consensus disorder prediction 487 542 - -
Ahy7g0407 667 CDD DEADc 114 309 - -
Ahy7g0407 667 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 53 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0407 Ahy-Chr7 3499646 3503456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0407 108 479 Eukaryotic Initiation Factors Gene Family AT3G19760 32.447 1.58e-65 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0407 - - ahf:112702088 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0568 17 5494721 5498520 Ahy7g0407 7 3499646 3503456 hybridization