Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0394 ATGATGAACAACAACAGCACTATTCCTGGTTGGAACTTTGAGAGTGATGCCTGTGTCATCAATCAAAAGAGTCCAATAGGGCTGGACCAAGATCTTGTAGAGCTTCTATGGAAAAATGGGCAAGTAGTATTGAGCAGCCAAACACAAAGGAAACCAGTTCAGAAAAGTGATGCATCATCAACATTAAGAAATGGTGTTCATTGTGGAAACTCAAGTAGTAATTTGAGTCAACAAGAAGATGAGACAGCTTCATGGATTCAATACCAAGTTGAGGATCATCCAATGGGACAAGAACTTTGCTCATCAAATCTTTTATCTCAATTGACACCTTGTGAAGTTGAGGCTTACAAGCCAATCAAGCAATTGGAAGAACCAAAGTTTGCAAAATTTGCTACCCCAAATGCAAATTTAAGTCCACAACAACAAAACAACAATACAAAACCGATAAATCCTATGCCTGCTCCAAGATTCCAGGTTGCTCCTGATTCATCTAATCAGAAAACCAATGACTTTGTTGGTGGATCATCATCATCACAAAAGGTTCCAAAGTTTTCTCATCATTTTTCAGCACCCGCACAACAAAAGTTTAGGGAGAAAGTTAGTGGTAACAATAATGTGCTACAAAGTGAGGGTAGGGAGTGTTCAGTTATGACAGTTGGATCAAGTCACTGTGGCAGCAACAACATCATCCCTCAGGAACAAGATACTACTTTCTCTGAAGCAGTTAAAGATTGTGTTCAGAGAAGTGTTCCTAATTGGAGTAACAATAAGGGGAAATCTTCAGAGATGATTGAGGCAACTGTGACTTCATCCTCTGGTGGCTCAGGTAGTAGTCTTGGAAAAACTACTTGTTCTTTATCAACAGGAAATCATCTTAGCCTAAAGAGGAAAATCACAGATGCAGATGAATCAGAAGAACAAAGTGAGGCCACAGAGCCTAAATCAGGTGTTGGAAACAAAACATCTCAGAGATCAGGATCTTCTAGAAGAAACCGTGCAGCAGAAGTGCATAACCTATCTGAAAGGAGAAGAAGAGACAGGATCAATGAGAAAATGAGAACACTCCAACAACTCATACCAAACAGTAATAAGACAGACAAAGCATCAATGCTAGAAGAGGCAATTGAATACTTGAAGTCACTTCAGTTACAGCTTCAGGTAATGTGGATGGGAGCAGGGATGACACCAGTGATGTTTCCTGGGATTCAGCATTACATGTCACAAATGAGTGCAATGGGAATGGCTGCAGCATCACAACCTTCTCTTCCTTCTATGCAAAATCCAATGCAAATACCAAGAATGCCCTTGACCAATCCAACATGCCTTCTACTGTGTCTGTGCCTCATCATCAAACGCCTTCAAACCAGGCTTTGA 1374 0.4054 MMNNNSTIPGWNFESDACVINQKSPIGLDQDLVELLWKNGQVVLSSQTQRKPVQKSDASSTLRNGVHCGNSSSNLSQQEDETASWIQYQVEDHPMGQELCSSNLLSQLTPCEVEAYKPIKQLEEPKFAKFATPNANLSPQQQNNNTKPINPMPAPRFQVAPDSSNQKTNDFVGGSSSSQKVPKFSHHFSAPAQQKFREKVSGNNNVLQSEGRECSVMTVGSSHCGSNNIIPQEQDTTFSEAVKDCVQRSVPNWSNNKGKSSEMIEATVTSSSGGSGSSLGKTTCSLSTGNHLSLKRKITDADESEEQSEATEPKSGVGNKTSQRSGSSRRNRAAEVHNLSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQLQLQVMWMGAGMTPVMFPGIQHYMSQMSAMGMAAASQPSLPSMQNPMQIPRMPLTNPTCLLLCLCLIIKRLQTRL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0394 457 MobiDBLite consensus disorder prediction 134 151 - -
Ahy7g0394 457 MobiDBLite consensus disorder prediction 134 183 - -
Ahy7g0394 457 MobiDBLite consensus disorder prediction 250 286 - -
Ahy7g0394 457 CDD bHLH_AtPIF_like 332 395 - -
Ahy7g0394 457 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 332 381 IPR011598 GO:0046983
Ahy7g0394 457 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 395 IPR036638 GO:0046983
Ahy7g0394 457 Pfam Helix-loop-helix DNA-binding domain 336 382 IPR011598 GO:0046983
Ahy7g0394 457 PANTHER TRANSCRIPTION FACTOR PIF5 8 438 - -
Ahy7g0394 457 MobiDBLite consensus disorder prediction 159 183 - -
Ahy7g0394 457 Gene3D - 327 388 IPR036638 GO:0046983
Ahy7g0394 457 SMART finulus 338 387 IPR011598 GO:0046983
Ahy7g0394 457 MobiDBLite consensus disorder prediction 46 80 - -
Ahy7g0394 457 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 8 438 IPR031066 -
Ahy7g0394 457 MobiDBLite consensus disorder prediction 311 329 - -
Ahy7g0394 457 MobiDBLite consensus disorder prediction 298 345 - -
Ahy7g0394 457 MobiDBLite consensus disorder prediction 330 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0394 Ahy-Chr7 3378382 3385865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0394 10 442 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 34.685 1.15e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy7g0394 HLH 4.80E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0394 K16189 - gmx:100811777 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0557 17 5377786 5385380 Ahy7g0394 7 3378382 3385865 hybridization
Ahy17g0557 17 5377786 5385380 Ahy7g0394 7 3378382 3385865 PCT
Ahy7g0394 7 3378382 3385865 Ahy17g0557 17 5377786 5385380 PCT
Ahy7g0394 7 3378382 3385865 Ahy7g0394 7 3378382 3385865 PCT
Ahy17g0539 17 5222517 5226190 Ahy7g0394 7 3378382 3385865 PCT
Ahy7g0378 7 3228003 3231831 Ahy7g0394 7 3378382 3385865 PCT