Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0386 ATGAGAACTTGGGAGAAAATTGGAGTAAGACAATACAATAAATCAGAACTTCCAAGGTTGAGATGGACACCTGAACTCCATGAACAATTTGTTGAAGCTGTTGAAAGCCTTGGTGGAAAACACAAGGCAACTCCAAAGCAAATTTTGCAGCAGATGCCAGTGAAAGGATTAAGAATTGCTCACATCAAAAGCCATCTTCAGATGTACAGAAATTTGAAGGGACATGCTTCCCTCTCAGTGGATCACTTGATGGAAGAATATCAACATGTTAAGGATCTCAAAATCACCTCCATTCCTTCACCAAAAAGATCATCGATAGTGACCAACTTAACAGATTCAAATTATGAAAGGAGGATTTTGAGGGAAGACCTTCATCTATCAAACGGCATTTCACAAATCAGTGAAGAAACTGATTATGATTTAAACCAGGAAGCTGAATCAAGTGGAGGCTTATTAACTTGTGATGATGAATTAAACGAAGAAGAAAACAATAATAATAGTAACAGTAATAGTAGTAGAGTAATTCATCAATTTATTCCTGCTGTCTCATTCTCTTTTAACACTAGTACTGTGCCTCTAAAACAAGACATAATGCATTTTTCGACAACTATGACAACGACGACAACACCAACAACTGCAGTTGATTCTAGTATCTTTGTACCATCATCTACCCCAAACAATAATTATATAAATTTAGACCTAAGAATATGA 711 0.3586 MRTWEKIGVRQYNKSELPRLRWTPELHEQFVEAVESLGGKHKATPKQILQQMPVKGLRIAHIKSHLQMYRNLKGHASLSVDHLMEEYQHVKDLKITSIPSPKRSSIVTNLTDSNYERRILREDLHLSNGISQISEETDYDLNQEAESSGGLLTCDDELNEEENNNNSNSNSSRVIHQFIPAVSFSFNTSTVPLKQDIMHFSTTMTTTTTPTTAVDSSIFVPSSTPNNNYINLDLRI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0386 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Ahy7g0386 236 Gene3D - 17 73 - -
Ahy7g0386 236 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 6 171 - -
Ahy7g0386 236 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 71 IPR006447 GO:0003677
Ahy7g0386 236 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
Ahy7g0386 236 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Ahy7g0386 236 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 171 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0386 Ahy-Chr7 3314129 3319014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0386 8 71 G2-like Transcription Factor Family AT1G14600 67.188 4.32e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy7g0386 Myb_DNA-binding 9.10E-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0386 - - aip:107608315 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0549 17 5300232 5305608 Ahy7g0386 7 3314129 3319014 hybridization