Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0281 ATGCGGAGACCCAAATCAAAAGATTTCCGGAAGCAACAGCGAATTTCCGAGGAGAGCGAGATTGAGCTTCTAAAATCATGGATCGAGAGCCAGAAACCAGAGTCGGGTTCCAACCCAATGTCCCTTCCTCCTTTTCCCAAAAACGCGCCAGTGGGGCGCGTAGACGACACCGCGTTTTCGCGGTACGCTGGTGTTGGTAGGTTCCAGCAGTTACCGCTTTCGAAGAAGACGAAGGATGGGTTGAGAGCGGCGAAGTTCGTGTCGATGACGGAGATTCAGAGGGCTTCGCTGCCCCACGCTCTTTGTGGCCGAGATATTCTCGGCGCCGCCAAAACGGGTTCCGGAAAAACTCTTGCTTTCATCATCCCTGTGTTGGAGACGTTGTATAGAGAGAGATGGGGACCTGAGGATGGTGTTGGGAGTATTATAATATCTCCTACAAGGGAACTAGCTGGTCAGTTGTTTGATGTGTTGAAGTCTGTTGGCAAGTTCCATAATTTCAGTGCTGGTCTTCTCATTGGTGGTCGCAAGGATGTTGACATGGAGAAGGAACGAGTCAATGAGCTCAACATATTGATTTGCACTCCCGGTCGCCTACTGCAACACATGGATGAGACTCCCAATTTTGAATGTTCGCAGATGCAGGTTTTGGTACTAGATGAGGCTGATCGTATTCTCGACAGTGGGTTCAAGAAGGAACTAAATGCAATCATTTCACAACTACCAAAGCGTAGACAAACCTTGCTTTTCTCAGCAACCCAGACAAAGTCAATTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATCTGAGTGTGCATGAGGAGTCTGTGACTGCCACTCCTACACTTTTGAAGCAAATTGTGATGGAGGTTGCACTTGACCAAAAGTTAAACATGCTGTGGAGTTTCATAAAGACTCACCTTCAGTCGAAAATACTTGTTTTTCTTTCAAGTTGTAAACAGGTAAAATTCGTGTTTGAAGCATTTAAAAAACTACACCCTGGCATTCCGTTGAAGTGTCTACATGGGAGGATGAAGCAGGAAAGAAGAATGGCAATCTATTCCGAGTTTTGTGAGAAGCGCTCTGTGCTCTTTTCGACTGACGTGGCAGCAAGAGGCCTTGATTTTAATAAAGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCTGAAAATGTAGCATCATACATACACAGAGTTGGCCGTACTGCTCGTTATAAATCTGTTGGAAAGTCAGTTTTATTTCTGTTGCCTTCAGAAATGCAAATGTTTGAGAAGTTAAAAGCAGCAAAAGTTCCTGTTCACTTTAATAAGCCAAAGAAAGAATTAGTACAACCAGTTTCGACTTTGTTGGCATCTTTACTGGTCAAGTATCCAGATCTGCAGCATCGGGCTCAAAGGGCCTTTGTCACATATTTGAGATCCATACATATACAGAAGGATAAAGAGATATTTGATGTTATGAAACTACCTATTGATGAATATTCAGCATCATTAGGCTTACCAATGACCCCCAAAATCCGTTTCCTGAACCAAAAAGGAAACCAAAAAATTAAATCTAAGGGTGCATTGGCAAAAACAATTTTAGATGAACCACAACATCAAAAAGAGGAAAATGAATTGAAGATATCCATAAAGGAGCTAGACTCAAGTGATTCTGAGGGTGAGGAAACAGAAAATGATCTTCTTTTGGCAGCTGATAACCCGAAAGAAGAAGGAAAGGCATCTGAAGATGCAGAAATCATGCCTGCAACTCGTATATTGAAGAAAAAGAAGCTCAAAATCAATGTACATCGGCCACTGGGGACTAGGGTTGTATTTGATGATGAAGGTCACACACTTCCTCCTCTAGCCAGGATTGCTGATACGCAAAGCGGCAAGGAATCATTGCTGCTTGACCCAGAACAAAAAGCTGAATACTATAGAAAGATGCGCGAGGATTTGAAGAAGGCAGACAAGGAAGACAAGCTTCTGGAGCGACAACGGCGTAGAGAAAAAAGAATCAAACAGAAGATGAAGTGGAAGGAAGGAAACATGGATAAAGATGGAGATGAAGATGATGATGTTTCTGGGTCCGAATCAGATAAAGCCACGGCAAGACCGAATAAAAAGAGTAAAGTATATTTTGACAGTGACAGTGATGATGGTGAAAGAAATGAAGCCACAGGGGAGGGAGCCGTTGGTGCTGGTTCTGTTAGTTTGGAGGAGCAAGAAGCTCTAGCTTTGAAATTATTGAATTCCATGCACTCATCATAG 2259 0.4338 MRRPKSKDFRKQQRISEESEIELLKSWIESQKPESGSNPMSLPPFPKNAPVGRVDDTAFSRYAGVGRFQQLPLSKKTKDGLRAAKFVSMTEIQRASLPHALCGRDILGAAKTGSGKTLAFIIPVLETLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKFHNFSAGLLIGGRKDVDMEKERVNELNILICTPGRLLQHMDETPNFECSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPTLLKQIVMEVALDQKLNMLWSFIKTHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSVGKSVLFLLPSEMQMFEKLKAAKVPVHFNKPKKELVQPVSTLLASLLVKYPDLQHRAQRAFVTYLRSIHIQKDKEIFDVMKLPIDEYSASLGLPMTPKIRFLNQKGNQKIKSKGALAKTILDEPQHQKEENELKISIKELDSSDSEGEETENDLLLAADNPKEEGKASEDAEIMPATRILKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKESLLLDPEQKAEYYRKMREDLKKADKEDKLLERQRRREKRIKQKMKWKEGNMDKDGDEDDDVSGSESDKATARPNKKSKVYFDSDSDDGERNEATGEGAVGAGSVSLEEQEALALKLLNSMHSS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0281 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 427 IPR027417 -
Ahy7g0281 752 SMART DUF4217_3 447 510 IPR025313 -
Ahy7g0281 752 MobiDBLite consensus disorder prediction 28 49 - -
Ahy7g0281 752 MobiDBLite consensus disorder prediction 650 734 - -
Ahy7g0281 752 Pfam DEAD/DEAH box helicase 90 260 IPR011545 GO:0003676|GO:0005524
Ahy7g0281 752 Pfam Helicase conserved C-terminal domain 298 407 IPR001650 -
Ahy7g0281 752 SMART helicmild6 325 408 IPR001650 -
Ahy7g0281 752 CDD DEADc_DDX10 77 275 - -
Ahy7g0281 752 PANTHER RNA HELICASE 57 529 - -
Ahy7g0281 752 MobiDBLite consensus disorder prediction 693 722 - -
Ahy7g0281 752 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Ahy7g0281 752 Coils Coil 642 662 - -
Ahy7g0281 752 Pfam Domain of unknown function (DUF4217) 452 508 IPR025313 -
Ahy7g0281 752 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Ahy7g0281 752 SMART ultradead3 85 289 IPR014001 -
Ahy7g0281 752 CDD SF2_C_DEAD 286 417 - -
Ahy7g0281 752 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Ahy7g0281 752 Gene3D - 54 278 IPR027417 -
Ahy7g0281 752 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 452 IPR001650 -
Ahy7g0281 752 Gene3D - 284 531 IPR027417 -
Ahy7g0281 752 PANTHER ATP-DEPENDENT RNA HELICASE DDX10-RELATED 57 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0281 Ahy-Chr7 2244210 2248492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0281 93 429 Eukaryotic Initiation Factors Gene Family AT3G19760 29.240 2.40e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0281 K14776 - gmx:100792106 1179.85