Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0271 ATGGTGGCAACAAGGTGTAAGGAGGTTTTCTTTGGAATATTCATGGAAGCCATGGAAACAATTCTTTATGCTGCATTCACTGTTATTCTAGCACTAGGAGGATCAATAGTAGGAACAATAGCAGGAGGAATCAAAGGGCAAACAACAGAAGCTGGTTTTCTTGATGGAGCTGGAAAAGGAGCAGTTACAGGAGCCATTGCTGCCATTGAATTGTTGAACTTTAGAGCCATTGATGACCCTTTAACCAAGGCACTGATGAGCAGTTTATTAAATGGGAAAATCTTTATGGAATGGATATGTCCAGCTGTTGCTCAAGCCTATCACTTGCATATGAACACAGCAGAAACAAGTTCACAGAGAGAAGTATCATCAAATATTTATGAAAACAAAGGAGTTACAGGGATGGCACAGAGTGTAATTCTGAAGCTTCCATTTCAGAAATTTAAATCCAATAAGAAACTAATGTACATGACAAGCTGCTCAATTTGCTTTCAGGATTTTGAGGATGAAGAATTGATTAGGATACTTCCAAAATGTGGCCACATTTTTCATTTACAATGTATAGACAAATGGTTAATCCAACAAGGATCATGCCCTATCTGTAGAACTCATGTTTCTTCTTATCACATTCATGACTTGTAG 642 0.3785 MVATRCKEVFFGIFMEAMETILYAAFTVILALGGSIVGTIAGGIKGQTTEAGFLDGAGKGAVTGAIAAIELLNFRAIDDPLTKALMSSLLNGKIFMEWICPAVAQAYHLHMNTAETSSQREVSSNIYENKGVTGMAQSVILKLPFQKFKSNKKLMYMTSCSICFQDFEDEELIRILPKCGHIFHLQCIDKWLIQQGSCPICRTHVSSYHIHDL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0271 213 SMART ring_2 160 201 IPR001841 -
Ahy7g0271 213 Pfam Ring finger domain 159 202 IPR001841 -
Ahy7g0271 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 211 IPR013083 -
Ahy7g0271 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 205 IPR044523 -
Ahy7g0271 213 CDD RING-H2_PA-TM-RING 160 202 - -
Ahy7g0271 213 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 205 - -
Ahy7g0271 213 SUPERFAMILY RING/U-box 159 207 - -
Ahy7g0271 213 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0271 Ahy-Chr7 2170652 2174079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0271 2 205 C3H Transcription Factor Family AT5G66070 34.112 9.43e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0271 - K19041 gmx:100305612 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0401 17 3885422 3889908 Ahy7g0271 7 2170652 2174079 hybridization