Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0261 ATGATTTCTGGAAGATGTGCTGCTTGCAAGAATCAAAGAAGAAAATGCCCTTCTGATTGCATTTTCTCTCCATATTTTCCTGCCAATGATCCTCAAAAGTTTGCTTGTGTCCACAAAATCTATGGTGGCAGTAATGTTGGAAAAATGCTTCAGGGAATCCCAACCTATCTAAGAGAACAAACTGCAAATGCATTGTATTTAGAAGCAAAATGGAGGATTCATGACCCTGTTTATGGGTCTGTTGGCATTATCTCTTCATTGTATGAACAAATTAAAAATGCAGAAATTGAACTAGCAAAAATTCAAACTCAGATTACTTTCTACAAGCTCCAAACCCAACATGTTGAAGCCGAACCAAATTCGGAGGTTTTGCAATCACAAAGCAGCAATATGGAGCAGTTTGAGTGGGACAATCCAACTATAGCTTCTTGGTTCAATTGA 441 0.3787 MISGRCAACKNQRRKCPSDCIFSPYFPANDPQKFACVHKIYGGSNVGKMLQGIPTYLREQTANALYLEAKWRIHDPVYGSVGIISSLYEQIKNAEIELAKIQTQITFYKLQTQHVEAEPNSEVLQSQSSNMEQFEWDNPTIASWFN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0261 146 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Ahy7g0261 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 118 - -
Ahy7g0261 146 Coils Coil 84 111 - -
Ahy7g0261 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 118 - -
Ahy7g0261 146 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0261 Ahy-Chr7 2040543 2042287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0261 1 115 AS2 family AT3G26620 56.410 6.70e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy7g0261 LOB 1.20E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0261 - - gmx:100790640 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0390 17 3763724 3764909 Ahy7g0261 7 2040543 2042287 hybridization