Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0208 ATGACACAACAAGAGTTTGTTAATAACAATTATAAAATCAAAGAGCCTCGTCTTGTGGCAAGAAAATTCTTGGCTAAACCTCAACATGAAGGTGTTGGAGCTGTTGTTAGAAGAAGCATTGGAAGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGTATTGGATGAATTCTCAGTCACTGCTCCTGCTGGTTTTCCAGATCATCCACACAGAGGCTTTGAGACTGTCACATACATGTTACAGGGAGCTGTAACACATGAAGATTTTGAAGGGCATAAAGGAACAATTGAAGCTGGTGATTTGCAATGGATGACTGCAGGGAGAGGAATAGTTCATTCAGAAATGCCTGCTTCTCAAGGAACTCAAAAGGGTCTTCAGCTATGGATCAATCTTGCTTCACAAAACAAAATGGTTGAACCAAGGTATCAAGAAATATTAAGCAAGGACATAGCAGAAGCTATGAAAGATGGTGTGAAGGTTAGAGTAATAGCAGGGGAAGCACTTGGTACAAAGTCTCCAATCTACACAAGAACACCAACAATGTACTTGGACTTCATTCTCAAACCTGGTTCACACTTGCAACAACCTATACCAAAATCTTGGAATGCTTTTGTGTATGTTTTGGAAGGAGAGGGTATTTTTGGAAACCAAAAGTCTCAACCTATAAGCTCACACCACATTCTTCTTCTTGGTTATGGTGATGGATTAGAGGCATGGAACAAATCTTCTAAGCAACTTAGGTTCATTCTTGTTGGAGGTGAACCACTAGGTGAACCTGTGGTTCAATTTGGGCCATTTGTTATGAACACTCAAGAAGAAATTGACCAAACCATTGATGATTTTGAGAACTATGCTAATGGATTTGAGAAAGCAAGGCACTGGAGGTCTCAAAGTGCACTTAGCCTTGACTATTGA 915 0.3989 MTQQEFVNNNYKIKEPRLVARKFLAKPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPASQGTQKGLQLWINLASQNKMVEPRYQEILSKDIAEAMKDGVKVRVIAGEALGTKSPIYTRTPTMYLDFILKPGSHLQQPIPKSWNAFVYVLEGEGIFGNQKSQPISSHHILLLGYGDGLEAWNKSSKQLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYANGFEKARHWRSQSALSLDY* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0208 304 Gene3D Jelly Rolls 151 256 IPR014710 -
Ahy7g0208 304 CDD cupin_pirin_C 179 255 - -
Ahy7g0208 304 Gene3D Jelly Rolls 30 282 IPR014710 -
Ahy7g0208 304 CDD cupin_pirin_N 34 131 - -
Ahy7g0208 304 SUPERFAMILY RmlC-like cupins 17 296 IPR011051 -
Ahy7g0208 304 PIRSF Pirin 15 295 IPR012093 -
Ahy7g0208 304 Pfam Pirin C-terminal cupin domain 182 285 IPR008778 -
Ahy7g0208 304 PANTHER OS09G0484800 PROTEIN 10 300 - -
Ahy7g0208 304 Pfam Pirin 36 129 IPR003829 -
Ahy7g0208 304 PANTHER PIRIN-RELATED 10 300 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0208 Ahy-Chr7 1623202 1626981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0208 16 292 Calmodulin-binding Proteins AT3G59220 60.215 5.30e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0208 K06911 - gmx:100790637 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0320 17 2963996 2968186 Ahy7g0208 7 1623202 1626981 hybridization
Ahy17g0320 17 2963996 2968186 Ahy7g0208 7 1623202 1626981 PCT
Ahy7g0208 7 1623202 1626981 Ahy17g0320 17 2963996 2968186 PCT
Ahy7g0208 7 1623202 1626981 Ahy7g0208 7 1623202 1626981 PCT