Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0199 ATGGACGCAGCTGCTACCATTACACCCACCACCTCGAGCTCAGGCTCAGAGCACCATGCCCGGGTCCATGAAGATCCGAATCCAACCGGGTCGGGTTTGAATGCTGAAGCTTCTGTTGGTGGGGCAAGGTACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCTCGGTCGGCGTGCATAACCATACCTCCGGGGTTGAGTCCGACGTCGTTTTTGGAGTCTCCTGTGCTCCTTTCAAACATGAAGGTAGAGCCTTCACCAACTACAGGTTCCCTTCCAAGGATTCATCAAACAGCACATGGTTCTATGGTTTCTGCTGCATCGACTGCATTTCCTATAACTTCTGTATGCTTCCATAATAATACCGTTGATGACAGAAAATTGAGCTTCTTTGAGTATAAACCGCCTGGTAGATCGAATATGGTTCCTTCAGACTTCAACAACCATGAAAGTGAACAATCTCCTCGAATTGAAGGTCCAGGAAAAGCTCAACCATTTGCATCTTCACCATTAGCCGAAAGTGAGCCAGCAGATCCTTCTAATGAATTAAGCCTGTCATCGCCGGTTCAAAAGGTCAGTTCGGTTGAAGTTGATTTGGATGAGTTTAACCACAGAGGAAACGCATCCACTGGGCTTCAGGCATCACATGTTGAAGTTAGAGGCAGTGGAGCTCCGATCGCACCCGAGAAGGCATCGGATGATGGATACAATTGGCGAAAATATGGACAGAAACTTGTCAAAGGGAGTGAATTTCCCCGCAGCTATTACAAATGCACACATCCTAACTGTGAAGTGAAGAAACTCTTTGAACGCTCTCATGACGGTCAAATCACTGAGATAATATACAAAGGAACACATGATCATCCTAAACCTCAACCTAGCCGCCGATACTCTGCTGGTACCGGTATGTCTGTGCAAGAAGAGAGATCTGATAAGGCTTCTTTGGCCGGCCAAGATGACAGAGCATCCGGTATGTATGGTCGGGGATGTCATGCAGCTGATCCCAACAGTACTCCAGAGCTATCTCCTCGGGCAACAAACGACGACAGTCCAGAGGGTGCTGGCTTTATGTCAAATAGGACTAATGATGAGGTTGATGATGATGATCCCTTCTTGAAGAGAAGAAGAATGGAACTTGGAAATGCTGACATCACTCCTGTTGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTTAGTGAGGTTGATATTTTGGATGATGGGTACCGCTGGCGAAAGTATGGACAGAAGGTGGTAAGAGGCAACCCAAATCCTAGGAGTTATTACAAATGCACGAATGCCGGTTGCCCTGTAAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACTACATATGAAGGTAAGCACAATCACGACGTACCGGCCGCAAGGAGTAGTAGCCACGACATGGCTGGACCGGCTGCAGCCGCGGCCGCGGCCGCAGCTGCGATGATTGGACATACAAGAATCAAGTTAGAAGAAAGCGATACGATTAGCCTCGACCTTGGTATGGGAATCAGCTCAGCAACTGAAAATAGATCAAAGGGCATTTCAGAATATGGTGAAAGTCAAAGTCAAATTCACACCAACAACAACAATTTCAAGTTTGTTCATACTTCCACTCCAGCTCCAGCAGCATACTTTGGTGTTCTAAATCACAGCTCAATTTCTTATGGTTCTAGAGAAAATAGGAATGATGCTCCATCTTTAAACCATTCCTCATATCCTTGCTCACAGAACATGGGAAGAATACTAACTGGTCCATGA 1785 0.4672 MDAAATITPTTSSSGSEHHARVHEDPNPTGSGLNAEASVGGARYKLMSPAKLPISRSACITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRIHQTAHGSMVSAASTAFPITSVCFHNNTVDDRKLSFFEYKPPGRSNMVPSDFNNHESEQSPRIEGPGKAQPFASSPLAESEPADPSNELSLSSPVQKVSSVEVDLDEFNHRGNASTGLQASHVEVRGSGAPIAPEKASDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYSAGTGMSVQEERSDKASLAGQDDRASGMYGRGCHAADPNSTPELSPRATNDDSPEGAGFMSNRTNDEVDDDDPFLKRRRMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSSSHDMAGPAAAAAAAAAAMIGHTRIKLEESDTISLDLGMGISSATENRSKGISEYGESQSQIHTNNNNFKFVHTSTPAPAAYFGVLNHSSISYGSRENRNDAPSLNHSSYPCSQNMGRILTGP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0199 594 MobiDBLite consensus disorder prediction 205 236 - -
Ahy7g0199 594 SUPERFAMILY WRKY DNA-binding domain 230 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 MobiDBLite consensus disorder prediction 139 189 - -
Ahy7g0199 594 MobiDBLite consensus disorder prediction 1 16 - -
Ahy7g0199 594 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 Gene3D WRKY domain 226 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 Gene3D WRKY domain 392 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 SUPERFAMILY WRKY DNA-binding domain 399 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 MobiDBLite consensus disorder prediction 567 594 - -
Ahy7g0199 594 MobiDBLite consensus disorder prediction 1 36 - -
Ahy7g0199 594 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 560 IPR044810 GO:0003700
Ahy7g0199 594 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 Pfam WRKY DNA -binding domain 408 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0199 594 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 36 560 - -
Ahy7g0199 594 MobiDBLite consensus disorder prediction 282 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0199 Ahy-Chr7 1553276 1558115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0199 47 594 WRKY Transcription Factor Family AT4G26640 55.872 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy7g0199 WRKY 1.50E-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0302 17 2850690 2855544 Ahy7g0199 7 1553276 1558115 hybridization
Ahy17g0302 17 2850690 2855544 Ahy7g0199 7 1553276 1558115 PCT
Ahy7g0199 7 1553276 1558115 Ahy7g0199 7 1553276 1558115 PCT
Ahy7g0199 7 1553276 1558115 Ahy17g0302 17 2850690 2855544 PCT