Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0130 ATGGCGGACTCGGACAACGAGTCAGGAGGCGCGCAGAACGCCGGGAACAATAACAGCGAGCTGTCGCCGCGGGAACAGGACCGGTTCCTACCGATCGCGAACGTGAGCAGGATCATGAAGAAGGCGCTTCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGTGTTTCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAGCGCGAGAAGCGGAAGACGATCAACGGCGACGATTTGCTTTGGGCGATGACGACGCTAGGGTTCGAGGAGTACGTGGAGCCGCTCAAGATTTATCTTCAGAGGTTCAGGGAAATGGAAGGTGAGAAGAGCGTTGCGGCGCGTGACAAGGACGCGGTTGGGGTCAACGCCGCATACGATTACGGAGGAGGTGGTAGTGGTGGCGCAATGGGGATGATGATGAACCAGGGACACGTGTACGGCTCTGGTGCGTTTCATCAAGTGGCTGTGAGTGGTGGAGGTAGTGGTGGTCCTGTTATGGGTAAGAGTGGTGGGCCCAATTATCCGGGTGCTGGATCTAATGCAGGTAGACCCAGATAG 588 0.5799 MADSDNESGGAQNAGNNNSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREMEGEKSVAARDKDAVGVNAAYDYGGGGSGGAMGMMMNQGHVYGSGAFHQVAVSGGGSGGPVMGKSGGPNYPGAGSNAGRPR* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0130 195 MobiDBLite consensus disorder prediction 1 24 - -
Ahy7g0130 195 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Ahy7g0130 195 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Ahy7g0130 195 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Ahy7g0130 195 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Ahy7g0130 195 MobiDBLite consensus disorder prediction 1 26 - -
Ahy7g0130 195 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Ahy7g0130 195 SUPERFAMILY Histone-fold 26 135 IPR009072 GO:0046982
Ahy7g0130 195 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 155 - -
Ahy7g0130 195 Gene3D Histone, subunit A 17 135 IPR009072 GO:0046982
Ahy7g0130 195 MobiDBLite consensus disorder prediction 172 195 - -
Ahy7g0130 195 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 155 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0130 Ahy-Chr7 937224 938469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0130 1 159 CCAAT-HAP3 Transcription Factor Family AT4G14540 71.698 6.38e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy7g0130 CBFD_NFYB_HMF 1.80E-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0130 K08065 - gmx:100813169 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0234 17 2248108 2249342 Ahy7g0130 7 937224 938469 hybridization
Ahy17g0234 17 2248108 2249342 Ahy7g0130 7 937224 938469 PCT
Ahy7g0130 7 937224 938469 Ahy17g0234 17 2248108 2249342 PCT
Ahy7g0130 7 937224 938469 Ahy7g0130 7 937224 938469 PCT