Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0082 ATGAACATGAATATGAAGGATTCTGCATATAGAGTTGAAACGACTTGTCGTCTTGCACAATGGAGAATCGACAATTTAGCTTCATGCACTTATCGCAAATCCGATCCTTTCACCATAGCTATCTGGAACTGGCATTTATCTGTGGAGAGGAACAGAGTTTCTTGTGTTAAGTTGTTTCCGGAAGCAAGGAACAATCTTCCACTTTCATCTTTCGTCATTCGCCTGCTTAGTTCTGTCAAAGATCGCAAGGCGTTGGCTCAATTAGAGGTAAGAGACAAATTGCTGAGCAGCAGAGAAGGATTTGTGTGGGGAATTGAGGTTCCACTTCCAGGGAGATTCATTATTCATGTTGAGTTCCTCGATTTGAAAGCTTCATCTTCAAATGGAGAAGATATTTGTTCCATTTGGCCTAACAGAATTATGCAGCAAAGATCAAATTCAGCAGCTCTTGAATCTCTCAGTCGAATGTTAATGGAAGGAATCCACACTGACATAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCATCGCGCAGTTCTTGCTGCTCGATCGCCTGTGTTTCGTAGCATGTTCTCTCATGATCTTAAAGAGAATGATGATTCCACCATAAACATCTCAGACATGTCAACTGAATCTTGCCAAACATTTATAAACTACCTTTATGGCATCATTGAACACCAAGAATTTCTAATGCATAGATTGGAACTTGTTCGTGCTGCAGATAAGTATGACATTTGTGATTTAAGAGATGTGTGTCATGAGAGCCTTGTAGAGGATATTGATTCAAGCAATGTTCTTGAGAGGCTTCAGAATGCATATTTGTATGGATTGCCAAAGCTGAAGAATAGTTGCATGCAATATCTTGTAAAGTTTGGAAAGATATTTGACATTAGGGATGATTTCATTGTATTCTTGCAGACTGCAGATAGGGATTTGATCACTCAAGTCTTTCATGAAATTCTTGGTGTCTGGAATGGTTTTTGA 987 0.3921 MNMNMKDSAYRVETTCRLAQWRIDNLASCTYRKSDPFTIAIWNWHLSVERNRVSCVKLFPEARNNLPLSSFVIRLLSSVKDRKALAQLEVRDKLLSSREGFVWGIEVPLPGRFIIHVEFLDLKASSSNGEDICSIWPNRIMQQRSNSAALESLSRMLMEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHDLKENDDSTINISDMSTESCQTFINYLYGIIEHQEFLMHRLELVRAADKYDICDLRDVCHESLVEDIDSSNVLERLQNAYLYGLPKLKNSCMQYLVKFGKIFDIRDDFIVFLQTADRDLITQVFHEILGVWNGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0082 328 Gene3D Potassium Channel Kv1.1; Chain A 138 291 IPR011333 -
Ahy7g0082 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Ahy7g0082 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Ahy7g0082 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
Ahy7g0082 328 PANTHER OS08G0495500 PROTEIN 5 328 - -
Ahy7g0082 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Ahy7g0082 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 328 IPR044714 -
Ahy7g0082 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0082 Ahy-Chr7 528389 530224 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy7g0082 BTB 9.60E-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0082 K10523 - gmx:100790186 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0186 17 1874724 1877542 Ahy7g0082 7 528389 530224 hybridization
Ahy7g0082 7 528389 530224 Ahy7g1305 7 27355019 27360992 PCT