Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0048 ATGCTTCCTCCACGACAGCAATCCCGGGCTGGTGGACCACAAACATCCCTGTCTCTAGTTCCATTGGATACTCGTCTTTCTCCGGAGGAACCTAGATCAAACTCTGACAACCTCCGTGAATCTCCTACTGAAAGTGCCAGTTCTCGAGAAACTTGGCCTACAGCTGATGCAATCGCATCAAAGAAGATTGAGAATGGTAAAGCTGAGATTGATTGTCCTGAGCAGTCTGTTATTCACCGTGTTTCTAGTGCAGACAAAATTAGTCTTCAGGACATTGCAAGAGAAAGAGTTGATGTAATATGTGAAAAAATGCATCATCTACCCGAAGAATTTCTAGAGGAGCTAAAAAACGGACTTAGAGTCATCCTTGAGGGAGGTAATGGCTCACAGCATCGGGAAGAATTTTTCATTTTGCAGAAGCTTGTTCAGAGCAGATCTGATTTAACAGCCAAGACATTGATTAGAGCACATCGAGTGCAGCTTGAAATCCTTGTTGCCATAAATACTGGAATTCAGGGATTCTTACATCCAAGCATCAGCCTATCACAGACTTCCCTGATTGAGATATTTGTGTACAAGAGATGTAGAAACATAGCTTGCCAAAGCCAGCTTCCAGCTGAAGATTGTACCTGTGAAACATGCACTAACAGCAATGGTTTCTGCAATCTTTGCATGTGTGTAGTCTGCAGCAAGTTTGACTTTGAAGTAAATACATGCCGCTGGATTGGATGTGACTTGTGTTCTCACTGGACTCACACGGATTGTGCCATTCGTGAGCAGCTTATTTGCATGGGCCCTTCTGTGAAGAGTGGAGCAGGAGCTAGTGAAATGGTTTTCAGGTGTCAAGCCTGTAACAGGACTTCAGAACTGTTGGGTTGGGTTAAAGATGTCTTCCAACATTGTGCACCATCATGGGATGGGGAAGCCTTAATGCGAGAACTTGATTTTGTTAGTAGGATTTTCCATGGCAGTAAGGATCAGCGAGGAAGGAAACTATTTTGGAAGTGTGATGATCTCAAGGAAAAACTTAAGACTGGAAAGGTGGATGCTAAGGCAGCATGCAGAGCAATTTTGATGGTTTTCCAAGAGCTTGAGATGGACTCTCCTAAGAGCCTGGAAAATTCAGAAGGTGGAAGGCTGATTGCTCCTCAAGAGGCATGCAATAGAATTGCTGAAGTGGTGCAGGAGGCTATAAGAAAGATGGAAATAGTCGCTGATGAGAAGATGAGGATGTTCAAGAAGGCTCGCTTGGCTCTTGAGGCTTGTGATCGTGAATTAGCCGATAAGGCCAGAGAAGCAGCAGAGCTCAAGATGGACAGGCAGAAAAAGAAGGTTCAGATTGAAGAGCTTGAGAGAATTGTGCGGCTTAAAACGGCAGAATCTGATATGTTCCAACTGAAAGCTAATGAAGCTAAAAGGGAGGCTGAGAAGCTCCAGAGGATTGCTCTTGCCAAGTCAGACAAATCAGAGGAGGAATATACTAGCAATTATTTAAAACAAAAATTAAGTGAGGCTGAGGCTGAGAAGCAATATCTGTATGAGAAGATCAAATTGCAGGAAAGTTCTCGAGTATCACAGAGCAGTAGCGGCGGTGATCCCTCTTCAATGCTGATGTATTCCAAAATCCATGATCTTCTGTACAGTGTTCCTCCCAAGGCAGACAGTCAATCTAATGAGTGCCACCCTTTCCGAACAAATCCATGA 1704 0.4396 MLPPRQQSRAGGPQTSLSLVPLDTRLSPEEPRSNSDNLRESPTESASSRETWPTADAIASKKIENGKAEIDCPEQSVIHRVSSADKISLQDIARERVDVICEKMHHLPEEFLEELKNGLRVILEGGNGSQHREEFFILQKLVQSRSDLTAKTLIRAHRVQLEILVAINTGIQGFLHPSISLSQTSLIEIFVYKRCRNIACQSQLPAEDCTCETCTNSNGFCNLCMCVVCSKFDFEVNTCRWIGCDLCSHWTHTDCAIREQLICMGPSVKSGAGASEMVFRCQACNRTSELLGWVKDVFQHCAPSWDGEALMRELDFVSRIFHGSKDQRGRKLFWKCDDLKEKLKTGKVDAKAACRAILMVFQELEMDSPKSLENSEGGRLIAPQEACNRIAEVVQEAIRKMEIVADEKMRMFKKARLALEACDRELADKAREAAELKMDRQKKKVQIEELERIVRLKTAESDMFQLKANEAKREAEKLQRIALAKSDKSEEEYTSNYLKQKLSEAEAEKQYLYEKIKLQESSRVSQSSSGGDPSSMLMYSKIHDLLYSVPPKADSQSNECHPFRTNP* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 232 252 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 103 125 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 145 160 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 160 175 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 448 468 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 186 207 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 305 324 IPR004082 -
Ahy7g0048 567 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 487 509 IPR004082 -
Ahy7g0048 567 MobiDBLite consensus disorder prediction 38 54 - -
Ahy7g0048 567 PANTHER PROTEIN OBERON 2 1 558 - -
Ahy7g0048 567 SMART PHD_3 225 285 IPR001965 -
Ahy7g0048 567 Pfam PHD - plant homeodomain finger protein 195 318 IPR032881 -
Ahy7g0048 567 PIRSF UCP025218 1 553 IPR004082 -
Ahy7g0048 567 MobiDBLite consensus disorder prediction 1 22 - -
Ahy7g0048 567 MobiDBLite consensus disorder prediction 1 54 - -
Ahy7g0048 567 Pfam Coiled-coil region of Oberon 413 546 IPR032535 -
Ahy7g0048 567 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 558 IPR004082 -
Ahy7g0048 567 Coils Coil 419 488 - -
Ahy7g0048 567 CDD PHD_OBE1_like 225 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0048 Ahy-Chr7 291014 293769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0048 195 297 PHD Gene Family AT5G57380 29.808 9.25e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0048 - - gmx:100795450 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0154 17 1628319 1630468 Ahy7g0048 7 291014 293769 hybridization