Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0025 ATGCAGGCATCAGAGCATCATAGAAGTTCAAGTATGTACTATCAACCAATGCAGCAGGTTGAGGCATACTGCATGCCACAATATCAAGCTCTGAATCATCATCAGTATTACAATGATGGAGGCCATGGTATTGGAAGCAGATTCTCTAATCAAAGTTCTTCTGAAATTTACTGCACATTGGAGTCATCATCTGCAACCGGCAGTTTTAATGTTTACAATTCTCCTTCAACTGTTAGTTTCTCACCAAATGGTAGCCCGGTTTCTCTTCAAGATTCTCAATCTCAGTCATATCCACCTGACAATAACTATGGATCTCCTATGAGTGGTTCGTGCATAACTGACGATTTAAGTACCTTCAAGCACAAGCTGAGAGAGTTGGAGAGTGTGATGTTTGGTCCTGATTGTGATAATCTTGATAGTTATGACAGTTCATTCAAGGATGCAACTGATTTCATGTCATCCGAGATGGACAGCTGGAGACAAACAATGGTGGCAATTTCTTGCAAGAACTTAAAGCATGTACTCGTCGTGTGTGCCAAAGCGATTGCAGAGAATGATCTGCTAATGGCACAATGGTTGATGGATGAACTGAGGCAGATGGTGTCTGTATCTGGCGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGCCTAGTTGCACGGTTGTCTTCTTCCGGGAGTTCAATCTACAGAGCCTTGAGATGCAAGGAACCAGAAAGTGCTGAGCTCCTCTCCTATATGCACATACTCTATGAGGTTTGCCCCTACTTCAAATTCGGATACATGTCTGCGAATGGAGCAATCGCAGAAGCTATGAAGGATGAAGACAGAGTTCACATAATTGATTTTCAAATTTCTCAAGGGAGCCAGTGGATCACTTTGATTCAAGCTTTTGCAGCTAGGCCTGGAGGACCACCACACATCCGAATTACAGGTATTGATGATTCAACATCGGCTTATGCGCGCGGTGGTGGGCTGCACATTGTGGGAAAGAGGTTGTCCAAGCTTGCAGAGCATTTTAAAGTGCCATTTGAATTTCATGCTGCAGCTATATCTGGTTGTGATGTTCAGCTGCATAATCTTGGTGTTCGACCGGGCGAGGCATTAGCTGTGAATTTTGCATTCATGCTACATCACATGCCAGATGAAAGTGTGAGCACCCTGAATCATAGGGATAGGCTCTTGAGGCTGGTCAAGAGCCTATCCCCGAAAGTGGTGACATTGGTGGAGCAAGAATCCAACACCAACACAGCTGCATTCTTTCCACGTTTCCTCGAAACTATGGACTACTACACAGCCATGTTCGAGTCGATAGACGTGACTCTTCCGAGGGAACATAAAGAGAGGATCAATGTGGAGCAGCATTGCTTGGCAAGGGATTTGGTTAACATCATAGCATGTGAAGGGGTTGAGAGAGTGGAAAGACATGAAGTGCTTGGGAAATGGAGGTCAAGGTTTGCAATGGCTGGTTTCAGTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATCAAGAAACTGCTTGATAACTACAGTGATAGATATAGGCTTGAAGAGAGAGATGGAGCATTGTATCTTGGTTGGATGAATAGAGATTTGGTTGCCTCTTGTGCATGGAAATGA 1626 0.4428 MQASEHHRSSSMYYQPMQQVEAYCMPQYQALNHHQYYNDGGHGIGSRFSNQSSSEIYCTLESSSATGSFNVYNSPSTVSFSPNGSPVSLQDSQSQSYPPDNNYGSPMSGSCITDDLSTFKHKLRELESVMFGPDCDNLDSYDSSFKDATDFMSSEMDSWRQTMVAISCKNLKHVLVVCAKAIAENDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSSSGSSIYRALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTLNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFSPYPLSSLVNGTIKKLLDNYSDRYRLEERDGALYLGWMNRDLVASCAWK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0025 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Ahy7g0025 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Ahy7g0025 541 Pfam GRAS domain family 171 541 IPR005202 -
Ahy7g0025 541 MobiDBLite consensus disorder prediction 82 104 - -
Ahy7g0025 541 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0025 Ahy-Chr7 147111 150095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0025 12 541 GRAS Transcription Factor Family AT5G48150 66.791 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy7g0025 GRAS 2.60E-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0025 - - gmx:100808300 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0144 17 1560750 1563699 Ahy7g0025 7 147111 150095 hybridization