Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2841 ATGCAAGGATCTTCTCTCTTTTTGCTTCCCTGGAATACTGGAGGAATGCATCAAACAAAGGGATCTATTATTTGTGTTCAGGTTACAGGTGGTGCCCTGTGGAATATAGGGTTGACAACAAGAGATGATACCTTGTACTTCACACACGGTTGGAAACAGTTTGTGAAAGATCACTCCTTGATAGAGAATGATTTCCTGGTCTTTAAGTCCAATGGTGAATCAACATTCGATGTTCTAATATTCGATGGGAAGAACTTCTGCGAGAAGGCTGCTGCTTATTTCGTTCGAAATGTCAGAAACGGGAATCCGGAAAATGGGGTTGGACGCTTGACAATGAGAAAAGACACTGAGAACTCTAATGCTGGTGTAGAATGTGCATCACCTCAGAAATCTGTGCATGTTAACAGTTTCCCAGTGCCAGACACTGCCTATGGTGATGCCGGTGTTGAAGTTGATGCTAATGGAGTGATGATGTCAGAAGGTCGCACCCACACTACTGGTAAAAGAATTAGGAAGCCGACTCGAGCTTTTAACCATTTCCAAACTAAGAGGAGACCAGTAAGGGTGACAAAAACATCTAATGCACATAAGGAAGTAGGAAACGTGGTAATCGATGCAGATGCACATCCTGAACCTGCTTCCGCGGGTAAAAGTGAGGGTGGGAATTATGAATTATGTCTCACAGAGGAGGCCTGTCACTGA 702 0.4387 MQGSSLFLLPWNTGGMHQTKGSIICVQVTGGALWNIGLTTRDDTLYFTHGWKQFVKDHSLIENDFLVFKSNGESTFDVLIFDGKNFCEKAAAYFVRNVRNGNPENGVGRLTMRKDTENSNAGVECASPQKSVHVNSFPVPDTAYGDAGVEVDANGVMMSEGRTHTTGKRIRKPTRAFNHFQTKRRPVRVTKTSNAHKEVGNVVIDADAHPEPASAGKSEGGNYELCLTEEACH* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2841 233 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 30 183 IPR044837 -
Ahy6g2841 233 Gene3D - 11 87 IPR015300 -
Ahy6g2841 233 SUPERFAMILY DNA-binding pseudobarrel domain 20 83 IPR015300 -
Ahy6g2841 233 SMART B3_2 7 84 IPR003340 GO:0003677
Ahy6g2841 233 ProSiteProfiles B3 DNA-binding domain profile. 1 84 IPR003340 GO:0003677
Ahy6g2841 233 CDD B3_DNA 24 82 IPR003340 GO:0003677
Ahy6g2841 233 Pfam B3 DNA binding domain 17 82 IPR003340 GO:0003677
Ahy6g2841 233 PANTHER PLANT-SPECIFIC B3-DNA-BINDING DOMAIN PROTEIN 30 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2841 Ahy-Chr6 114253020 114261269 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2841 23 107 REM Transcription Factor Family AT4G33280 45.349 1.55e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy6g2841 B3 7.00E-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2841 - - ahf:112697900 486.493