Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2835 ATGAGCAGTAGGAAAGGTTTCTGCTTCTCCCGCTTAAAGTTGCTGCTCCTGATTGTTACAGTTGCAGCAGCTGCTGATCATAACAGAACATGTACGCCCTCCGCATGCGGCAAAGTCACCACCATAACACATCCTTTCCGGCTGAGGGGCGACCCTGCAAGCTGTGGCGACCGGAGGTACGAGTTGTCTTGCGAGAATAACATCACCCTCTTATATCTTTTTCCCGGTAAAACCTACCATGTTCAGGCAATAAACTACAACAACTTCACGATCCGGCTTCTAGATCCAGCCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCCTAACCAATTTCAGTACCTTTGGGGATGACTATTATTACAAAACAGTCGCCGAAGTCGGCACCGGAAAATACGAATTCCTTCAAGAACGAGTCTCCTTAAATGGCTCCACACCGGAGGAGAACGCAGTGAGAATGTTCGAGCACGTGGTGTTCTTGAACTGCAGCAATCCGGTGAGGGACGATCCACGATACGTGAACACTGCTCCTTGCATTAAAGAAGGCGGTAATAATGTTTATGCTGTTCTTGGAGACTTGGCGGTGGTTGAATTAAGAGATGATTGCCGTGTGAAGCTGATTGCAGCCTCATCGTTTCTTGTTCCACCGAGATTATGGCAAGATTCAGTGTTCATCGAAGAGAACTTGGCATACTCTGAAATCCATAAGAAACTCAGTTACGGATTTGAACTTTCGTGGATGTATGAGTTTGCTTGTGAAGATAAATGCGGGATGAAGAATTTTTGCGTATTCAACGAAATCACTCAGAACATCACCTGTGGGGATCCGGATAATCCCGTCTGTGATTACACTTCACTGCTGAACTACAAATGTGGAAACGTGTCAAAGCTACAAATAATTGCACAAGATTTTGCATACGGAATTTTGAAAGGACTTCGCAAAGTGTGGCACACGGATAGTGGTGAACACTTCTCTAAAAGAGATGTAATACCTGTTGTTAAGGTTGGATTATTCATGGGATTGTTTCTGATCTCATACATAATCCTCAAATACTCAATAGGTGTCATGTTTTTCTTTGCATTGTTGATCTACACGTTTCGAAGAAGGCATATATCAATCTACGAAAATATTGAGGATTTTCTACAAGGAAATACTCTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACGAGAGGTTTTAAGGAGAAGTTGGGAGAAGGAGGATTTGGTGCAGTGTACAAAGGAAAACTACAAAGTGGGCCTTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAAGCTAATGGCCAAGAATTTATCAGTGAAGTTGCTACCATTGGTAGAATACACCATGCAAATGTAGTAAGGTTGATTGGGTTTTGTGTGGAAGGTTCAAAACGCGCTCTTATATATGAATTCATGCCAAATGGTTCTTTAGATAAATATATATTTTCTAAAGAAACAAATGTATCTCTAACTTCGGAGAAGATGTTTGAGATATCCCTTGGTGTGGCACACGGTATGGCTTATCTACATGAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCTCACAACATTCTTCTTGACGAGAACTTCATTCCTAAGGTGTCAGACTTTGGTCTTGCAAAACTATATCCTCTTGATAATAGTATTGTGACTTTGACTGCGGCAAGAGGAACCATTGGTTACATGGCCCCAGAATTGTTCTATCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTGTATAGTTTTGGAATGCTTTTGATGGAAACAGCAAGTCAAAGAAGAAATTTAAATCCTCATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCAGTTGGCTGCTGAGGAAACTGATGAGATTGAGATGGAAACTTTTATGCATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCATTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAATAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTGTCCAAATGATGTGATTCAAAGAGATTCCCAAGTTGACTCATCAGGAATAGATGCTTCAAATAATTCTTATGTGTCTTCAAGTTTTGAGGAGGAAAGTACATCCAATCCCTTGCTAAAGTTTTCTGCTTGA 2211 0.403 MSSRKGFCFSRLKLLLLIVTVAAAADHNRTCTPSACGKVTTITHPFRLRGDPASCGDRRYELSCENNITLLYLFPGKTYHVQAINYNNFTIRLLDPAISENDCSTLPRYSLSLTNFSTFGDDYYYKTVAEVGTGKYEFLQERVSLNGSTPEENAVRMFEHVVFLNCSNPVRDDPRYVNTAPCIKEGGNNVYAVLGDLAVVELRDDCRVKLIAASSFLVPPRLWQDSVFIEENLAYSEIHKKLSYGFELSWMYEFACEDKCGMKNFCVFNEITQNITCGDPDNPVCDYTSLLNYKCGNVSKLQIIAQDFAYGILKGLRKVWHTDSGEHFSKRDVIPVVKVGLFMGLFLISYIILKYSIGVMFFFALLIYTFRRRHISIYENIEDFLQGNTLMPIRYSYKEIKKMTRGFKEKLGEGGFGAVYKGKLQSGPFVAIKMLGKAKANGQEFISEVATIGRIHHANVVRLIGFCVEGSKRALIYEFMPNGSLDKYIFSKETNVSLTSEKMFEISLGVAHGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMETASQRRNLNPHAEHSSQLYFPFWIYDQLAAEETDEIEMETFMHEERSELAKKMFIIALWCIQLKPSDRPSMNKVVEMLEGDVASIEMPPKPSYCPNDVIQRDSQVDSSGIDASNNSYVSSSFEEESTSNPLLKFSA* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2835 736 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 14 707 - -
Ahy6g2835 736 ProSitePatterns Protein kinases ATP-binding region signature. 411 433 IPR017441 GO:0005524
Ahy6g2835 736 Gene3D Transferase(Phosphotransferase) domain 1 480 693 - -
Ahy6g2835 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Ahy6g2835 736 Gene3D Phosphorylase Kinase; domain 1 382 479 - -
Ahy6g2835 736 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 707 IPR045874 GO:0004672
Ahy6g2835 736 Pfam Protein tyrosine and serine/threonine kinase 407 678 IPR001245 GO:0004672|GO:0006468
Ahy6g2835 736 SUPERFAMILY Protein kinase-like (PK-like) 390 679 IPR011009 -
Ahy6g2835 736 Pfam Wall-associated receptor kinase galacturonan-binding 31 95 IPR025287 GO:0030247
Ahy6g2835 736 SMART serkin_6 405 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2835 736 ProSiteProfiles Protein kinase domain profile. 405 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2835 Ahy-Chr6 114187374 114190927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2835 14 692 Receptor kinase-like Gene Family AT5G38260 33.333 9.74e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy6g2835 PK_Tyr_Ser-Thr 1.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2835 - - ahf:112697889 1084.32