Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2833 ATGGCAGCATTATTATTGGTGCTGCTGCTGAATTTGAATCTGGACATGGGAATTTACCATGATGATCCGGTTCCATGTCCCGTGCGTCTCTACTGTTCAGAAGACAAAACCAATATTCTTGAGCTGCCTGCCTTTCCATCCTCAGTAAAACTCCCCGTCACAAGCATTAGCTACACATCAAACACTTTACAAGTATATGATCCCAAACACTGTTTTCCACAACTCTTTCTCACACTCAATTATTCATCATTTTATCCTTTCCAATCCATTAAACAATCACTTGATTTCGATAGTTTTTATGATCCTCTACACCCAACAAACTGTACTTTCTTTGATTGTTCTTCAAGCGTGCCACCAAACATCCTCAGCGGCTACTACGAGGAACAAGATCTGTTATCTTGCCCGATTCTTATTGCTTTAGATGACGACAACATCATCGAATCCAACCTTGTATTGTGCACAAAATTGACTCGTCATGTCTTGCCAATTTCCGTATGTAAGATACAGTGGAATTGGGAACCATTATACTTGGTATGGTCGACAGAAACTTTCAAGAGTGGATGCTTTGTTGCTTGCAACGTATCCAACAATGGTACTGAACACCATGAATCCGTTCTTTTACCCCTTACAGGTGCAACTCTCCTTGTGCTAATAGTGGGTGTCATGTATCATATATATTGCTATTATAGAAACAAAGGAGAAGATCAAGAAAGAGTTGAAACTTTTTTGAAGGACTACAAAGCATTAAACCCAACAAGATTCTCTTATACTGATATCAAGAGAATTACTAAGCAGTTCAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTAACTAATCAAATTCTGGTTGCCGTCAAGATTCTCAATAAAGCAGATGGAGATGGGACAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTCATTGCTCTGTCAAGTGACAAGGAAACCTTCTTTGGATGGAACAAGATGCATCAGATTGCTGTGGGCATAGCCAAAGGGATTGAATACCTTCACCAAGGCTGTGACCAAAGAATTTTGCATTTCGACATTAATCCTCGCAATGTCTTGTTAGATCAAAGTTTCACTCCTAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCGAAGAATCGAAGCACTGTGTCCATGACAGCAGCAAGGGGAACCTTAGGATACATGGCGCCTGAAGTTTTTTCTAGAAACTTCGGTCATGTGTCTTATAAATCTGATATATACAGTTATGGGATGCTATTGCTTGAGATGGTTGGAGGAAGAAAGAATACAAACATGAGTCAAGAAACATTTCAAGTTCTATATCCGAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCTATCGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCCGTGCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGCAGAGGAAGATAAGTTGAAAGTGCCTCCGAATCCTTTTGAATCTATAGCTGCGACTAGTTCAAGTGCAATTATTCCAGCAAGATTCTTGAATTTGGAATTGGAAGTAATTCCAGAAACAGACTAG 1728 0.4034 MAALLLVLLLNLNLDMGIYHDDPVPCPVRLYCSEDKTNILELPAFPSSVKLPVTSISYTSNTLQVYDPKHCFPQLFLTLNYSSFYPFQSIKQSLDFDSFYDPLHPTNCTFFDCSSSVPPNILSGYYEEQDLLSCPILIALDDDNIIESNLVLCTKLTRHVLPISVCKIQWNWEPLYLVWSTETFKSGCFVACNVSNNGTEHHESVLLPLTGATLLVLIVGVMYHIYCYYRNKGEDQERVETFLKDYKALNPTRFSYTDIKRITKQFKDKLGEGAHGAVYKGKLTNQILVAVKILNKADGDGTEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSFIALSSDKETFFGWNKMHQIAVGIAKGIEYLHQGCDQRILHFDINPRNVLLDQSFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGHVSYKSDIYSYGMLLLEMVGGRKNTNMSQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEAEEDKLKVPPNPFESIAATSSSAIIPARFLNLELEVIPETD* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2833 575 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Ahy6g2833 575 Gene3D Transferase(Phosphotransferase) domain 1 339 545 - -
Ahy6g2833 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 574 IPR045874 GO:0004672
Ahy6g2833 575 Pfam Protein tyrosine and serine/threonine kinase 266 532 IPR001245 GO:0004672|GO:0006468
Ahy6g2833 575 SUPERFAMILY Protein kinase-like (PK-like) 244 534 IPR011009 -
Ahy6g2833 575 Gene3D Phosphorylase Kinase; domain 1 237 338 - -
Ahy6g2833 575 ProSiteProfiles Protein kinase domain profile. 264 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2833 575 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2833 Ahy-Chr6 114181826 114183746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2833 244 546 Receptor kinase-like Gene Family AT1G66910 47.910 1.40e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy6g2833 PK_Tyr_Ser-Thr 4.60E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2833 - - ahf:112805998 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3587 16 153485831 153487751 Ahy6g2833 6 114181826 114183746 hybridization