Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2830 ATGCCAGCCTTATTGCTGCTGCTGCTTGTGAGTTTGAATCTGAGCATAGGAATTTGCTATCAAGATGGGGATGGTGACGATGATCCAGTTGGATGTCCCGTGCGTGTGTACTGTTTAGAAAACAACACCAATATTCTTGAGCTGCCTGGCTCTTCTTCTTCAGTGAAACTCCCCGTCGGTTACATTAATTATACATCACAAACTTTACAAATTTATGATCCCAAAAACTGCCTTCCAGAACTCTTTCTCACACTCAACTACTCATCATTTTATCCTTTCCGATATATTAAACATTCACTTGATTTCGATAGTTATGATGATTCTCTAGAGCCAACAAACTGTACTTTCTTTGATTGCTCTTCAGTTGTGCCTGCAGGCATCCTCATCGGAGGAATCTACTACGAAGAATATCTGTTATCTTGCCCGATTTACAATTCTTTTGATGAGGACGATGTCGTCGAGGCCAACCTTATATTCTGCACAAAATTGGCCCGTCATGTCTTGCCAATTTCCGTATGTGCAGCTCTCCTGTTCTCAACACTGGGTGCCTTGTATTATATATATTGCTATTATAGAAACAAAGGGGAAGATCAACAAAGAGTTCAAACTTTTTTGAAGGACTATGAGGCATTAAACCCAACCAGATTCTCTTATGCTGATATCAAGAGAATTACAAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCCAATCAAATTCTGGTTGCTGTAAAGATCCTCAATAACACAGACGGAGATGGGAAGGAGTTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTCCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATTGCTTCGTCCAGCGACAAGGAAAGCTTTCTCGGATGGAACAAGTTGCATCAGATTGCACTCGGCATAGCTAAAGGGATTGAATATCTTCACCAAGGCTGTGATCAGAGAATTCTGCATTTTGATATTAATCCTTACAATGTCCTGTTAGATGACGGTTTCACTCCAAAAATTTCAGATTTCGGTTTGGCTAAGTTATGCTCCAAGAATCAAAGTACAGTGTCCATGACTGCAGCGAGGGGAACGTTAGGATACATGGCGCCAGAAGTTTTCTCCAGAAACTTCGGCAACGTATCTTACAAATCCGATATCTACAGTTATGGGATGCTGTTGCTTGAGATGGTTGGAGGAAGAAAAAATACAAACTCCAGTCAAGAAACATTTCAAGTTCTATATCCGAATTGGATACACAATTTGCTCGAAGGAGATGATACATATATTCCTATTGATGATGATGGAGATTTTAGAATTGCAAAGAAACTGGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTTCAGCGTCCGTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGAGGAAAGCAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGCAGCTGCGACTAGTTCAAGTGCAATTATTCCAGCAAGACGTCTGAATTTGGAGTTGGAAGTAATCCCAGAAACAGACTAG 1614 0.4164 MPALLLLLLVSLNLSIGICYQDGDGDDDPVGCPVRVYCLENNTNILELPGSSSSVKLPVGYINYTSQTLQIYDPKNCLPELFLTLNYSSFYPFRYIKHSLDFDSYDDSLEPTNCTFFDCSSVVPAGILIGGIYYEEYLLSCPIYNSFDEDDVVEANLIFCTKLARHVLPISVCAALLFSTLGALYYIYCYYRNKGEDQQRVQTFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNNTDGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIASSSDKESFLGWNKLHQIALGIAKGIEYLHQGCDQRILHFDINPYNVLLDDGFTPKISDFGLAKLCSKNQSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNSSQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVQRPSMKSVVQMLEGEESKLKVPPNPFESAAATSSSAIIPARRLNLELEVIPETD* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2830 537 SUPERFAMILY Protein kinase-like (PK-like) 207 496 IPR011009 -
Ahy6g2830 537 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 173 536 - -
Ahy6g2830 537 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 30 168 - -
Ahy6g2830 537 Gene3D Phosphorylase Kinase; domain 1 199 300 - -
Ahy6g2830 537 ProSiteProfiles Protein kinase domain profile. 226 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2830 537 Gene3D Transferase(Phosphotransferase) domain 1 301 507 - -
Ahy6g2830 537 PANTHER RUST RESISTANCE KINASE LR10-RELATED 173 536 IPR045874 GO:0004672
Ahy6g2830 537 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 168 IPR045874 GO:0004672
Ahy6g2830 537 Pfam Protein tyrosine and serine/threonine kinase 228 495 IPR001245 GO:0004672|GO:0006468
Ahy6g2830 537 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2830 Ahy-Chr6 114164557 114166953 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2830 188 508 Receptor kinase-like Gene Family AT1G66980 48.936 3.67e-102 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy6g2830 PK_Tyr_Ser-Thr 6.40E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2830 - - ahf:112805998 1070.46