Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2723 ATGTTGTGTGCTTGCTCAGGGGAGCAATTCAAATTCGAGGAGGCACCGCCGCAGTCACCGGAGTCATTGGCAACGAGAGATTTCTCTGCCAGTGGACTTTCTTCATCAAGGACTGGGGGTGATTGGGATTCTAAATTTGATCAGAACCAAGTTGAAGAAGCTGAATCAACTCTTAAAGAAGCTCTTTCTTTGAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCTGCCCTTCAAGTTTTTCAGGGCATTGAAATCAAGGCCTTGACACCAAGGATGATAAGAGCCATTGCTGAAAGAACTAGGCCAAAAAAACAACGTTCTAGAGCTGATAATGTGGTCCCTAATGTGATGTCAATGCATTCAGTAAGCCTTCTTGTTGAGGCAATCTTGCTTAAATCCAAGTCCTTAGAGGAACTCGGGCGATACACCGGGGCTGCAAACACGTGCAGCATAATTCTGGATATGGTTGAGTCTGCTCTTCCTAATGGAATGCCGGATGGCATCGCCGAAGAGTGTAAGTTGCAAGACATGTTCCACAGAGCAATTGAATTGCTTCCAACTCTATGGATCAAGGCAGGTAATTTAGACGAAGCTGTCATGGCTTATCGCCGTGCTTTGATCAAGCCGTGGAATATGGAGCCAGGAAAGTTGGCCAGTATGCAAAAAGATTTGGCCACCACACTACTCTATTGTGGTGCTGAAGTAGACCTGCCGCCACAATTACAAGCTAGGTCTCCAGCGACACCAAAGAGTAACATCGAAGAAGCAATACTTTTGCTATTAGTACTCATGGCAAAGATGGTGGTTCAGGAAATACAATGGGACAGTGAAACAGCGGATCATCTAACATTCGCACTTTCTGTTACCGGAATGTTTGAATCATTGGCTGATTATGTGGAGCAGATCCTTCCTGGTATCTATGATCGAGCCGAGAGATGGTACTTTCTTGCTCTTTGTTACAGTGCAGCTGGTCAGGACGAAGTGGCCTTGAATTTATTGAGGAAGTCTTGTGGTAGTTCTGAAGCAAATTGCAGACCCCATTTCCCTTCATTTTTGTTTGGTGCTAAACTGTGTTCCCGGTATCCAAACCATGCTCTTGAAGGCATTAAGTTTTCCCGCAAAGCTATCGATCTAGCAAAGCTTCAAAATAAGCATTTTTTGGGTCAGGGCAAAAAATTTCTGGGTGTTTGCTCCGGCACTGCGGCTAGAAGATCTGTGCTGGATTCTGAAAGAACTATATTTCAAAGAGAGTCTTTGAACTTTCTAAATGAGGCTGCTCTAAGTCAAAATGATGATCCTGAAGTGATCTTCAACCTTGGACTTGAAAATGCAATTCAAAGGAATCTTGATGCAGCTTTCGACAATATAATGATGTACTCAGATATGACTGTTGGTAGCTCGAAAAGAGGTTGGCAACTGTTAGCGCTCATAGTATCTGCACAACAGCGGTTTAAGGATTCAGAAACAATAGTTGATTTTGCGTTAGAAGATACTGAAAAGATTGACCAGTTAGAACTTCTGAGATTGAAAGCAGTACTCCAGATCGCGCAGCAGAAACCGAAGCAAGCAGTAGAGACCTACAGAATCTTGCTAGCACTGATCCAGGCTAAAAAGGAGCCTTGGCATCAAGATAAGAAGAACTTTGATCAAGCAAAAGCATTCAAACATGAGGCACTTCAAGAAAGGAAGTTGGAAATGGAAGCATGGCAGGATTTGGCAACAATATATGCAGACTTTAGTTCATTTCTTGATGCAAAAGCTTGTCTTGACAAAGCTCAGTTAATAGAATTTTTCTCTCCCAGAAGTTGGCACATTACTGGAATGTTATTTGAAGCGCAATCATTATACCAGGAGGCCTTTGTTTCATTCTCAATCTCATTGTCAATAGAACCTGATTACATTCCAAGTATTATTTCATCTGCAGAATTGATGATCAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGCTTTTTGATGAATGCATTGAGAATAGAACCAACAAACCATGATGCTTGGTTCAACCTTGGATTGGTTTCTAAAATGGAAGGTTCATTACAACAAGCAGCAGATTTCTTTCAAGCTGCATATGAACTCAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTAA 2160 0.4227 MLCACSGEQFKFEEAPPQSPESLATRDFSASGLSSSRTGGDWDSKFDQNQVEEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIEIKALTPRMIRAIAERTRPKKQRSRADNVVPNVMSMHSVSLLVEAILLKSKSLEELGRYTGAANTCSIILDMVESALPNGMPDGIAEECKLQDMFHRAIELLPTLWIKAGNLDEAVMAYRRALIKPWNMEPGKLASMQKDLATTLLYCGAEVDLPPQLQARSPATPKSNIEEAILLLLVLMAKMVVQEIQWDSETADHLTFALSVTGMFESLADYVEQILPGIYDRAERWYFLALCYSAAGQDEVALNLLRKSCGSSEANCRPHFPSFLFGAKLCSRYPNHALEGIKFSRKAIDLAKLQNKHFLGQGKKFLGVCSGTAARRSVLDSERTIFQRESLNFLNEAALSQNDDPEVIFNLGLENAIQRNLDAAFDNIMMYSDMTVGSSKRGWQLLALIVSAQQRFKDSETIVDFALEDTEKIDQLELLRLKAVLQIAQQKPKQAVETYRILLALIQAKKEPWHQDKKNFDQAKAFKHEALQERKLEMEAWQDLATIYADFSSFLDAKACLDKAQLIEFFSPRSWHITGMLFEAQSLYQEAFVSFSISLSIEPDYIPSIISSAELMIKLGMQSLPIARSFLMNALRIEPTNHDAWFNLGLVSKMEGSLQQAADFFQAAYELKLSAPVQKFE* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2723 719 ProSiteProfiles TPR repeat profile. 610 643 IPR019734 GO:0005515
Ahy6g2723 719 Gene3D Tetratricopeptide repeat domain 483 658 IPR011990 GO:0005515
Ahy6g2723 719 SMART tpr_5 320 353 IPR019734 GO:0005515
Ahy6g2723 719 SMART tpr_5 514 547 IPR019734 GO:0005515
Ahy6g2723 719 SMART tpr_5 610 643 IPR019734 GO:0005515
Ahy6g2723 719 SMART tpr_5 680 713 IPR019734 GO:0005515
Ahy6g2723 719 MobiDBLite consensus disorder prediction 22 45 - -
Ahy6g2723 719 Coils Coil 59 79 - -
Ahy6g2723 719 ProSiteProfiles TPR repeat profile. 680 713 IPR019734 GO:0005515
Ahy6g2723 719 MobiDBLite consensus disorder prediction 11 45 - -
Ahy6g2723 719 Pfam Tetratricopeptide repeat 44 92 - -
Ahy6g2723 719 SUPERFAMILY TPR-like 46 465 IPR011990 GO:0005515
Ahy6g2723 719 PANTHER PROTEIN NPG1 1 718 IPR043376 -
Ahy6g2723 719 Gene3D Tetratricopeptide repeat domain 42 347 IPR011990 GO:0005515
Ahy6g2723 719 PANTHER PROTEIN NPGR1 1 718 - -
Ahy6g2723 719 SUPERFAMILY TPR-like 554 710 IPR011990 GO:0005515
Ahy6g2723 719 Gene3D Tetratricopeptide repeat domain 659 715 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2723 Ahy-Chr6 112799013 112804253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2723 1 718 Calmodulin-binding Proteins AT1G27460 59.722 0.0 861