Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2716 ATGGGGACCGAGAGCACGACAAATTACTCTTATTTGGGGCGCAGCATAAGCCATCTCACCATCAACGAGGAGTCCTCTTCCTCCGCCTTTAGCGATTGCAACAGCGATAGATCCGGTGAATTCTCCGCTGCCTCTTCTCAGACTCGCCGCCTCCTACTTGCGTGTGCCACCGACAACTCTGACGAATTAATCCGACAGCTCGTGTCTGATCTGGGCTCTGATTCCGTCAATGAGAAAAAACAAGCAGCCATGGAGATCCGCCTCCTTGCGAAGAATAAGCCGGAGAATCGAATTAGAATCGCCGAAGCCGGAGCGATCAAACCGTTAATTTCGCTTATTTCGTCGCAAGACCTTCAACTTCAGGAGTACGGCGTCACAGCTATTCTCAACTTATCCCTATGTGACGAGAACAAAGACGCCATAGCTTCTGCCGGCGCGATTCGATCTCTGGTTCGGGTGCTGAGTTCAGGAAATTCAACAGCGAAGGAGAACGCGGCGTGCGCGCTTCTCCGACTGTCGCAGGTGGATGCTTATAAGCCGGCAATAGGAAGGGCGGGCGCAATTCCGCCGCTTGTAAAGCTTCTGGAAATCGGGAGTGGCCGCGGAAAGAAGGACGCGTCAACTGCTCTGTACTCGCTCTGTTCTACTAAAGATAACAAGGTAAGGGCAGTGAAGGCAGGGATAATGAGGGTGCTGGTGGAGTTGATGGCAGACTTGGAGGGAGACATGGTAGACAAATCAGCTTACGTGGCGAGCGTAGTGGTGACAGTAGCGGAGGGAAGGGCTGCGTTTGTGGCAGAAGGGGGGATTCCAGTGCTGGTAGAGATAGTGGAGGTTGGGACGCAGAGGCAAAAAGAAATTGCTGTGGTTATACTTTTGCAGATTTGTGAAGAGAGTGCTGCTTACAGAAAGCTTGTGTTTGACGAAAGCGCCATCCCTCCTTTGGTTGCTTTGTCCCAATCTGGCACCAATCGCGCCAAAGAAAAGGCAGAGAAACTGATTGAGCTTCTAAGGCAACCAAGATCCAACAATGGCACTGCTCGTGCGTCAGAAGTGTCACTGTGA 1065 0.5192 MGTESTTNYSYLGRSISHLTINEESSSSAFSDCNSDRSGEFSAASSQTRRLLLACATDNSDELIRQLVSDLGSDSVNEKKQAAMEIRLLAKNKPENRIRIAEAGAIKPLISLISSQDLQLQEYGVTAILNLSLCDENKDAIASAGAIRSLVRVLSSGNSTAKENAACALLRLSQVDAYKPAIGRAGAIPPLVKLLEIGSGRGKKDASTALYSLCSTKDNKVRAVKAGIMRVLVELMADLEGDMVDKSAYVASVVVTVAEGRAAFVAEGGIPVLVEIVEVGTQRQKEIAVVILLQICEESAAYRKLVFDESAIPPLVALSQSGTNRAKEKAEKLIELLRQPRSNNGTARASEVSL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2716 354 PANTHER U BOX DOMAIN-CONTAINING 1 346 - -
Ahy6g2716 354 Pfam Armadillo/beta-catenin-like repeat 178 215 IPR000225 GO:0005515
Ahy6g2716 354 Pfam Armadillo/beta-catenin-like repeat 94 132 IPR000225 GO:0005515
Ahy6g2716 354 Pfam Armadillo/beta-catenin-like repeat 135 173 IPR000225 GO:0005515
Ahy6g2716 354 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 1 346 - -
Ahy6g2716 354 Gene3D - 56 180 IPR011989 -
Ahy6g2716 354 Gene3D - 181 247 IPR011989 -
Ahy6g2716 354 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 104 146 IPR000225 GO:0005515
Ahy6g2716 354 SUPERFAMILY ARM repeat 61 336 IPR016024 -
Ahy6g2716 354 SMART arm_5 93 133 IPR000225 GO:0005515
Ahy6g2716 354 SMART arm_5 134 174 IPR000225 GO:0005515
Ahy6g2716 354 SMART arm_5 175 215 IPR000225 GO:0005515
Ahy6g2716 354 SMART arm_5 256 297 IPR000225 GO:0005515
Ahy6g2716 354 Gene3D - 248 348 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2716 Ahy-Chr6 112713775 112716582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2716 42 344 U-box Gene Family AT2G23140 48.515 2.26e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2716 - - gmx:100797550 492.656