Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2658 ATGAATTTTGATCTTGGTCTTGCTCTTGGAATTGGCTTCCATGATCAAGAGAAGAATTGCATGAAGAGAAAGGAGGATGATCCATCAAGAAAATGCAATAATAAGGCATACCCATCTCTTACATTAGGACCAGCAATAATTGATGATGATGATAATCATAATCAAGGTTCAAAGATTATTGAAGACTCTAATAATTCTTCTCCAAGTGCAGTGTCATCATTTTCCAACTCTTCTATCATAATCAAGAAGGAGAAAGATCAAGAATTTGAGGTTGAGATTGATGAGAAGGCTCCATCATCATCAAGGGATGAAGATGGTAACAACACAAAAAGGAAGAAACTTAGGCTCACAAAAGAACAATCTACAATCTTGGAGGAAAGCTTCAAGAACCATTCTAATCCCAATCCGAAGCAAAAGCAAGAATTGGCAACACACTTGCATCTGCTGCCGAGACAAGTGGAGGTATGGTTCCAGAACAGGAGAGCCAGGACAAAGCTGAAACAAACAGAATCAGATTGTGAGTTCCTGAAGAAGTGCTACGAAAATCTAACAGAAGAGAACAAAAGACTCCAAAACGAGCTTCAAGAACTGAAATCAATGCAAACAACAACACCCTTTTCCATGCAAATTCCACCAACAACTCTTACTATATGCCCTTCTTGTGAGACAATTTGGGCTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGGGAATTATTGCTTATAAGTTCAAAAGCTCATCAACATCATAATCATTTCTACAAAAATAATGGATATCCATTATTCAAACACTCATCATCCGCAACATGCTAG 846 0.3499 MNFDLGLALGIGFHDQEKNCMKRKEDDPSRKCNNKAYPSLTLGPAIIDDDDNHNQGSKIIEDSNNSSPSAVSSFSNSSIIIKKEKDQEFEVEIDEKAPSSSRDEDGNNTKRKKLRLTKEQSTILEESFKNHSNPNPKQKQELATHLHLLPRQVEVWFQNRRARTKLKQTESDCEFLKKCYENLTEENKRLQNELQELKSMQTTTPFSMQIPPTTLTICPSCETIWANNNNNNNNNNNNNNNNNNNNNGELLLISSKAHQHHNHFYKNNGYPLFKHSSSATC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2658 281 ProSitePatterns 'Homeobox' domain signature. 142 165 IPR017970 GO:0000981|GO:0006355
Ahy6g2658 281 Pfam Homeodomain 110 165 IPR001356 GO:0003677
Ahy6g2658 281 PANTHER - 36 240 - -
Ahy6g2658 281 MobiDBLite consensus disorder prediction 58 75 - -
Ahy6g2658 281 Pfam Homeobox associated leucine zipper 167 200 IPR003106 GO:0006355|GO:0043565
Ahy6g2658 281 MobiDBLite consensus disorder prediction 90 120 - -
Ahy6g2658 281 Coils Coil 166 203 - -
Ahy6g2658 281 CDD homeodomain 110 168 IPR001356 GO:0003677
Ahy6g2658 281 SUPERFAMILY Homeodomain-like 99 168 IPR009057 -
Ahy6g2658 281 ProSiteProfiles 'Homeobox' domain profile. 107 167 IPR001356 GO:0003677
Ahy6g2658 281 SMART halz 167 210 IPR003106 GO:0006355|GO:0043565
Ahy6g2658 281 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 36 240 - -
Ahy6g2658 281 MobiDBLite consensus disorder prediction 20 75 - -
Ahy6g2658 281 SMART HOX_1 109 171 IPR001356 GO:0003677
Ahy6g2658 281 Gene3D - 103 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2658 Ahy-Chr6 111972921 111975729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2658 103 224 Homeobox Transcription Factor Family AT2G22800 70.492 3.44e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy6g2658 Homeodomain 7.50E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2658 K09338 - gmx:100797650 254.218