Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2639 ATGGGTATCTGTATATCCATTGCATCTTCTGAGATTCATGGGGCCCCTAAAGAAGTTTATGATGAGAGTGTAATAACATTTGAAGCAAACAAGGTTGTAAGTGGTAATCAAGAATTTTGTTCTGCTTACTCTAAACAAGGGACCAAAGGACCCAACCAAGATGCTGCTTCTATTTACCAGGGTTATGGAATGGAAGATGGAATATTTTGTGGTGTTTTTGACGGGCATGGAAGGAATGGACGCATGGTGAGCAACATGGTTAACAGAAACTTATTTTCACTCATACTTGCCCAAAAGAATGCCTTTGAAAGGATTAATAACATAGAAAATGGTGATTCCAACACCCTAAACGACCATGTTGACGCAGTCGAAGGTGACAATCATAAGGATCCAAAGAATTTTCAGATATGGAAAGAAGCACTTACAAGTGCTTTCAAGGTCATGGACAAGGAGATCAAGTTGCAAGAGAATCTAGATTGTTCTTGCAGTGGAACAACTGCTATTGTTGTCGTAAAACAGGGCGAAGGTCTTATCATAGCTAATTTGGGTGACTCAAGGGCAGTGTTGGGGACAATCTGTGATGATGAACTCATGGCCATTCAATTGACCACAGATTTGAAGCCTGGATTACCTAGTGAAGCAGAAAGAATAAGGAGGTGCAATGGTTGTGTATATGCATTAAAGGAAGAACCACATATCCAAAGAGTGTGGATACCAAACTATGAGAACTCACCGGGACTTGCCATGTCTCGTTCTTTTGGAGATTTCTTGCTCAAAGAACATGGTGTCATTGCCATCCCTGATGTTTCATATTACCCTCTAACATCATCTGACCAATTCCTTGTTCTTGCAAGTGATGGTGCAAGTGTTACTAAATGCCATTTGATTGGAGACAAAATATGTTCACCAAATAACTTTTTTTTTTTTCTTTCAAAGAAAGAATAG 945 0.3947 MGICISIASSEIHGAPKEVYDESVITFEANKVVSGNQEFCSAYSKQGTKGPNQDAASIYQGYGMEDGIFCGVFDGHGRNGRMVSNMVNRNLFSLILAQKNAFERINNIENGDSNTLNDHVDAVEGDNHKDPKNFQIWKEALTSAFKVMDKEIKLQENLDCSCSGTTAIVVVKQGEGLIIANLGDSRAVLGTICDDELMAIQLTTDLKPGLPSEAERIRRCNGCVYALKEEPHIQRVWIPNYENSPGLAMSRSFGDFLLKEHGVIAIPDVSYYPLTSSDQFLVLASDGASVTKCHLIGDKICSPNNFFFFLSKKE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2639 314 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 288 - -
Ahy6g2639 314 SMART PP2C_4 30 300 IPR001932 -
Ahy6g2639 314 Gene3D - 23 292 IPR036457 -
Ahy6g2639 314 CDD PP2Cc 39 287 IPR001932 -
Ahy6g2639 314 ProSiteProfiles PPM-type phosphatase domain profile. 39 314 IPR001932 -
Ahy6g2639 314 SUPERFAMILY PP2C-like 26 287 IPR036457 -
Ahy6g2639 314 PANTHER ALPHABET, ISOFORM E-RELATED 1 288 - -
Ahy6g2639 314 Pfam Protein phosphatase 2C 114 287 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2639 Ahy-Chr6 111648597 111651778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2639 1 288 PP2C-type Phosphatase Gene Family AT5G26010 48.639 5.79e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2639 - - ahf:112697684 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3378 16 150693905 150697767 Ahy6g2639 6 111648597 111651778 hybridization
Ahy6g2639 6 111648597 111651778 Ahy17g3177 17 133577501 133579847 PCT
Ahy6g2639 6 111648597 111651778 Ahy8g0884 8 17128188 17130550 PCT
Ahy17g3177 17 133577501 133579847 Ahy6g2639 6 111648597 111651778 PCT
Ahy8g0884 8 17128188 17130550 Ahy6g2639 6 111648597 111651778 PCT