Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2611 ATGGCTGTGGTTTTTGATTGGAGTGTTGGAAATGAGACATGTGAAGAGTCTTTGAAAAGTGGTAGCAATGTTTGTAAGGGTAATTCCAATTGTGAGGAATCAGAGGCTGGAAATGGTTATCTATGCAAATGCAAGGAAGGTTATCAAGGAAATCCATATCATCCCATTGGTTGCATAGACATTGACGAATGTAAGACAGGAAATCACAAATGCATAAGTGAAAGTAATTGTATAAATACAAATGGGTCTTACACATGTTTTTGTCCTAAGGGTCAAACTGGAAATGGCACAAAGGAACAACGGGGATGTCAACAGCAAAATTTACTTTCCAAGGTTCTCATTGGTGCAAGTGGAGGAACCATTGCTGTTGTTGTGGCAACTTCATTGTTTATTTTGACACATCAAAAAAGAAAGCACATCAAACTCAAACAACAATACTTTAAGCAAAATGGTGGCTTAATGTTGTTACGACAACTCTCTACAAGAGAAGAATCCTCACAAATTACTCAGATTTTCACATCAGAGGAACTAAAGAAGGCTACCAACAATTATGATGAGAACTTAATACTTGGAAGAGGAGGTTACGGTACAGTTTTCAAAGGTTTTCTTGACGATAATAGAATTGTGGCAATCAAGAAGTCTAAAATAGTTGATCAGAGCCAAACAGAGCAGTTCATCAATGAGGTGATTGTTCTATCTCAAATCAATCATAGAAACATAGTGAAACTGTTAGGTTGCTGCTTAGAAGAAGAGGTTCCTTTACTAGTTTATGAGTTTGTTAACAATGGTACCCTCTTTGATTTTATCCACAATCAAATTCAAAACAATGTGAATAATTTGTTAACTTGGAACACACGTCTAAGGATAGCAACAGAGGCAGCTAGTGCTCTATCTTATCTACACTCAGCAGCATCTATATCCATTATCCATAGAGATGTCAAGAGTGCAAATATTCTCTTAGATGACAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCCAGATTGGTTCCACTAGATCAAGAAGCCTTGGCCACCATGGTGCAAGGAACTATTGGATACTTGGATCCAGAATACATGCAAACGAGTCAACTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTACTTGTAGAACTTCTAACAAGCGAAAAACCTCTTTCTTTTGATAGGACGGAAGAAAAGAGAAGCCTTGCTCTTTACTTTCTGTCCTGTCTAAAAGAGGATCGCTTGTTTGAAGTCGTTCGAGTCGAACTTTTGAGTGAAGAAAACAAGCAAGAGATTGAAGAGGTTGCTTTTCTTGCGGCAAAATGTTTGAGACTTAATGGGGATGAGAGACCAAGTATGAAGGAAGTGGCAATGAAATTGGAGGGATTACAGTTAATGCAAAAACAGCCTTGGATCAATGGGAACAAAAATTTGGAAGAGACTTGTTACTTGCTTCCCGGTTCATCATCCAAAACATGTGAATTTGGTGATAGTAGTTGCCATAAAAATGCTGGGTATGATAGCATCAGAGATCAAGTACTAATTTCTTTTGATGATGGAAGATGA 1557 0.377 MAVVFDWSVGNETCEESLKSGSNVCKGNSNCEESEAGNGYLCKCKEGYQGNPYHPIGCIDIDECKTGNHKCISESNCINTNGSYTCFCPKGQTGNGTKEQRGCQQQNLLSKVLIGASGGTIAVVVATSLFILTHQKRKHIKLKQQYFKQNGGLMLLRQLSTREESSQITQIFTSEELKKATNNYDENLILGRGGYGTVFKGFLDDNRIVAIKKSKIVDQSQTEQFINEVIVLSQINHRNIVKLLGCCLEEEVPLLVYEFVNNGTLFDFIHNQIQNNVNNLLTWNTRLRIATEAASALSYLHSAASISIIHRDVKSANILLDDNYTAKVSDFGASRLVPLDQEALATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTSEKPLSFDRTEEKRSLALYFLSCLKEDRLFEVVRVELLSEENKQEIEEVAFLAAKCLRLNGDERPSMKEVAMKLEGLQLMQKQPWINGNKNLEETCYLLPGSSSKTCEFGDSSCHKNAGYDSIRDQVLISFDDGR* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2611 518 SMART serkin_6 184 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2611 518 Coils Coil 418 438 - -
Ahy6g2611 518 CDD STKc_IRAK 190 460 - -
Ahy6g2611 518 Pfam Protein kinase domain 186 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2611 518 Pfam Calcium-binding EGF domain 60 98 IPR001881 GO:0005509
Ahy6g2611 518 SMART egfca_6 60 104 IPR001881 GO:0005509
Ahy6g2611 518 CDD EGF_CA 60 94 - -
Ahy6g2611 518 ProSiteProfiles EGF-like domain profile. 60 104 IPR000742 -
Ahy6g2611 518 Gene3D Phosphorylase Kinase; domain 1 152 259 - -
Ahy6g2611 518 Gene3D Transferase(Phosphotransferase) domain 1 260 478 - -
Ahy6g2611 518 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 77 88 IPR000152 -
Ahy6g2611 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Ahy6g2611 518 Gene3D Laminin 64 103 - -
Ahy6g2611 518 Gene3D Laminin 11 63 - -
Ahy6g2611 518 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Ahy6g2611 518 SMART egf_5 63 104 IPR000742 -
Ahy6g2611 518 SMART egf_5 13 59 IPR000742 -
Ahy6g2611 518 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 3 488 - -
Ahy6g2611 518 ProSiteProfiles Protein kinase domain profile. 184 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2611 518 SUPERFAMILY EGF/Laminin 60 95 - -
Ahy6g2611 518 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 488 IPR045274 GO:0007166
Ahy6g2611 518 ProSitePatterns Calcium-binding EGF-like domain signature. 60 86 IPR018097 GO:0005509
Ahy6g2611 518 SUPERFAMILY Protein kinase-like (PK-like) 162 458 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2611 Ahy-Chr6 111381771 111385396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2611 1 518 Receptor kinase-like Gene Family AT1G21230 51.711 1.13e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy6g2611 Pkinase 2.40E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2611 - - ahf:112805957 1026.93