Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2593 ATGGAATTCACCTCTTCTTCTTTGCAAATCACTCCCAGTGAAGACCCATCCATACCACAAGAGTTTTATTTCGGTGATTGCTTCTCCATCATCTTCAACTGCACCAAAAAATTGATCCAAATTATTGAACGCTCAAACCCAACTCCTGAGGTTCACTTTTCTTCTACTACAACTACAGCCACTGAAGCAATCTTGGTTCCTTCAGGCATCCTATGTAGTTGTACTCCACTCACAAACCTTAGCAGAGAAGACACAATCTTGTTACATGAAATCTTTTCTTCACTACCTGTGTCGCCTGAGGTATTGGACCAAATTTTACCTGACATAGGCGAAACTGCAAGAAGGATTTTAAGCGGTGAAAGGTGTGACTCCAACAGGCGGGAGATGGTTGTGAACTTTCATGTTACCTCCTACATTGTTGTTCAAGATTCTGATATCTATAATGATGATCTCTGTCAAAACTTTTTTGAACGAGTACAATTCGTGAATCCGTTGGAGGGATCGAAAACTGATGAGCAAGATGATGATGTTGAATGCGCGATTTGTTTGGAGAAGTTTGACTATGGTAATAAAGATTCAAGCGTAGAAATTGTTCGTACAAATTGCTGGCATGTTTTTCATGATCGCTGCTTGCTCCGCTGGCTCCGACGCTGTGCCAACTGTCAGTCGCCGTATTCTTGCCCGTTGTGCCGCAGCATCATATTTCCAACTGCACAGATAGATGATGAATAG 732 0.4208 MEFTSSSLQITPSEDPSIPQEFYFGDCFSIIFNCTKKLIQIIERSNPTPEVHFSSTTTTATEAILVPSGILCSCTPLTNLSREDTILLHEIFSSLPVSPEVLDQILPDIGETARRILSGERCDSNRREMVVNFHVTSYIVVQDSDIYNDDLCQNFFERVQFVNPLEGSKTDEQDDDVECAICLEKFDYGNKDSSVEIVRTNCWHVFHDRCLLRWLRRCANCQSPYSCPLCRSIIFPTAQIDDE* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2593 243 SMART ring_2 179 230 IPR001841 -
Ahy6g2593 243 SUPERFAMILY RING/U-box 172 237 - -
Ahy6g2593 243 PANTHER RING ZINC FINGER PROTEIN-RELATED 169 237 - -
Ahy6g2593 243 Pfam Ring finger domain 178 231 IPR001841 -
Ahy6g2593 243 ProSiteProfiles Zinc finger RING-type profile. 179 231 IPR001841 -
Ahy6g2593 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 241 IPR013083 -
Ahy6g2593 243 PANTHER RING ZINC FINGER PROTEIN-RELATED 169 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2593 Ahy-Chr6 111146527 111147258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2593 179 235 C3H Transcription Factor Family AT4G12190 43.860 1.77e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2593 - - adu:110273516 307.76