Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2577 ATGTCGACGGTATACGTTTTGGAACCGCCGACGAAGGGGAAGGTGGTTGTCAACACAACGCGGGGCCCACTCGACATCGAGCTATGGCCGAAGGAAGCACCCAAAGCTGTCAGGAACTTCGTTCAGCTCTGCATGGAAGGTTACTACGACAACACCATCTTCCACCGCGTCATCAAGGACTTTCTTGTTCAGGGTGGTGATCCCACCGGCACCGGCACTGGAGGTGAGAGTATTTACGGGGATGTTTTTGCCGATGAGTTTCATTCGCGTCTGAAATTCAAGCACAGAGGATTGGTTGCAATGGCCAATGCTGGGCCACCTAATTCAAATGGGAGTCAGTTTTTCATTACCCTTGACCGTTGTGACTGGCTTGATCGGAAGCATACTATTTTTGGAAAGGTAACAGGAGATACAATGTATAATCTTTTAAGGCTGGGTGAAGTTGAAACTGATAAAAACGATCGGCCTTTAGATCCACCTCCAAAGATATTATCAGTTGAGGTATTATGGAACCCATTTGAAGATATTGTGCCAAGAAATCTTCAGACTAAAGCTACACCTGTTACAGAAAATAAAGGTTTGAAGACAAAGGGTGTGAAAAAATTGAACTTGCTTTCGTTTGGGGAAGAAGCTGAAGAAGAAGAAAAGGAATTGGCATTGGTGAAGCAAAAGATTAAGAGCAGTCATGATGTCTTGAATGATCCTCGTCTTTTGAAGGAAGAAACTCCCAACAATGAAATGACTAAAGCAACAAGGGATTTGCAGTTAACTGTAAGAGATGCACTAAAAACCAAGAAGGAAGAGCCTCGGAAAGAGTTAGAAACTAGTAAAATTGATTCCAGTGATGATGACGACGACGACGAAGACGATGGCAATGAAGCAGATTTTGATGCAAGAATGCGCAGGCGAATACTGAAAAAGCGGAAGGAGTTGGGTGACCTTCCTCCCAAGCCAAAGGTGCAAAATGGAAGATCCAGTCCAGAGCGCCGGGATATTTCAGCAGCCAGGTCAAATGTTTCACGGGTGGTTGATGATGATGATGATGATGATGATAAACCGAGGGCGGAAAAGTTGTCCTTGAAGAAGAAGGGAATAGGGTCTGAAGCAAGAGCTGAACGTATTGCTAATGCTGATGCAGATTTGCAGCTACTGAATGAAGCTGAGAGAGGAAGACAGTTGCAGAAACAGAAGAGACGCAGATTACAAGGGCGTGAAGATGATGTTCTTGCCAAACTCGAGAAATTCAAAAATTCCTTATCAGCAAAGTCGGCACCCAAAGCCAGTGAATCTACTGATGTTGTTGATGACAAAGAACTGTCTGACTGGAAAAGTGTTGGCTTAAAGTTTGCCCCGGAGTCTGGCAAGGATCGCATGTCTCGCAACGAAGACCCGAACGACTATGTTGTGCATGACCCTCTTTTGGAGAAAGGGAAAGAGAAGTTCAATAGGATGCAAGCCAAACAAAAGAGACGAGAACGGGAGTGGGCTGGGAGATCCCTCACGTGA 1506 0.4522 MSTVYVLEPPTKGKVVVNTTRGPLDIELWPKEAPKAVRNFVQLCMEGYYDNTIFHRVIKDFLVQGGDPTGTGTGGESIYGDVFADEFHSRLKFKHRGLVAMANAGPPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPPKILSVEVLWNPFEDIVPRNLQTKATPVTENKGLKTKGVKKLNLLSFGEEAEEEEKELALVKQKIKSSHDVLNDPRLLKEETPNNEMTKATRDLQLTVRDALKTKKEEPRKELETSKIDSSDDDDDDEDDGNEADFDARMRRRILKKRKELGDLPPKPKVQNGRSSPERRDISAARSNVSRVVDDDDDDDDKPRAEKLSLKKKGIGSEARAERIANADADLQLLNEAERGRQLQKQKRRRLQGREDDVLAKLEKFKNSLSAKSAPKASESTDVVDDKELSDWKSVGLKFAPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMQAKQKRREREWAGRSLT* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2577 501 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 MobiDBLite consensus disorder prediction 234 369 - -
Ahy6g2577 501 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 198 IPR044666 -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 399 413 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 453 501 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 352 369 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 279 293 - -
Ahy6g2577 501 CDD cyclophilin_CeCYP16-like 8 179 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 386 437 - -
Ahy6g2577 501 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 198 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 256 278 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 294 315 - -
Ahy6g2577 501 MobiDBLite consensus disorder prediction 450 501 - -
Ahy6g2577 501 Coils Coil 204 224 - -
Ahy6g2577 501 SUPERFAMILY Cyclophilin-like 14 182 IPR029000 -
Ahy6g2577 501 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 MobiDBLite consensus disorder prediction 323 343 - -
Ahy6g2577 501 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Ahy6g2577 501 Coils Coil 384 404 - -
Ahy6g2577 501 Gene3D - 2 183 IPR029000 -
Ahy6g2577 501 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2577 Ahy-Chr6 110839799 110846164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2577 9 173 U-box Gene Family AT5G67530 48.485 3.54e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2577 K12737 - gmx:100793148 751.125