Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2566 ATGTCTACTACCATGACTACTACACCTAACATTGATTCAACCTTGCAAAACTCTACTTTGAACAGAGTCGTAGATTCTAGTTCAAGTAGTTGCAAGATGTACAAAGGTGTGAGGAAGAGGAAATGGGGCAAATGGGTATCGGAGATTAGGCTTCCCAACAGCCGAGAACGGATATGGTTGGGTTCTTATGACACCCAACAAAAGGCGGCTAGAGCTTTCGACGCCGCCCTCTACTGCCTTCGCGGCCGCCACGCCAGTTTCAACTTCCCCGACACGCCTCTTCATTTGGAGATCAACAATGTAAGTCACTACCATTCTCTCTCCCACCATGAAATTCAACAAGTTGCATCCAAATTCGCCAATAATTTTGATGCTGAGGAAGAAGAGGAACCGTCATCACAAAATGGCGCTAATAGTGCAAGCTCTGTGTGTGATTATGATGGGAGCAATAATAATAATAATAATAATAACAACAACAACAATGATAATAATAACGTGCAAGTGGACCATGGGGACATGGATTGGACATTTTTGAACGTGTTGGATGATCAAAATGATTCCAATTTTGATAACACTATTGGCTATGATTTTGGCCTCTACTATGGAGGGATAGATAAGGTGCACTCAGGTGAGTTTTTGTATACTACTACACCACCAACAACTTTTGAGGATAACAATAATGGTGATGCTGATGATGATGCTTTTTCTAACCATTCATTCCTTTGGAGTTGGAATTTTTGA 741 0.4143 MSTTMTTTPNIDSTLQNSTLNRVVDSSSSSCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQQKAARAFDAALYCLRGRHASFNFPDTPLHLEINNVSHYHSLSHHEIQQVASKFANNFDAEEEEEPSSQNGANSASSVCDYDGSNNNNNNNNNNNNDNNNVQVDHGDMDWTFLNVLDDQNDSNFDNTIGYDFGLYYGGIDKVHSGEFLYTTTPPTTFEDNNNGDADDDAFSNHSFLWSWNF* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2566 246 MobiDBLite consensus disorder prediction 124 168 - -
Ahy6g2566 246 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Ahy6g2566 246 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Ahy6g2566 246 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Ahy6g2566 246 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Ahy6g2566 246 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 18 246 - -
Ahy6g2566 246 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Ahy6g2566 246 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Ahy6g2566 246 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 246 - -
Ahy6g2566 246 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Ahy6g2566 246 MobiDBLite consensus disorder prediction 132 168 - -
Ahy6g2566 246 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2566 Ahy-Chr6 110700244 110701449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2566 26 147 AP2-EREBP Transcription Factor Family AT1G19210 59.016 2.26e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy6g2566 AP2 1.50E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2566 - - gmx:112999363 234.572