Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2549 ATGCGACAGATGGTTTGTAACAAAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAACAGGAAAAAGGATCACAAGCCAATCACACGCGTAATGTGTCAAGCAAAGATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTAAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTCGTTCCGGCATATCGAACAATGACTGACGCTGATAAAGCACAGGCTGATAGTTTGCACTTTTATGGTGTTAGAACTTGTCATATAATGGGGTTCATGGTGGCACAAAAAGGAGGTCCGAACAGGGCGGGATTCACAAAAAAAGATCAATATAACCATTTTGACAGATCGAGAAGTGCTAAGATAAAAGATGGTGATGCACATGCAGCATTGAGTTACCTAATTTCTAAGGCAGATGAAGATCCACTATTGCAAGGGAAGTTTACTTTGAAGGATGGTAAGCTTGATAATTTAGTGTGGGCTGATGGATCTAGCATCACTGATTACCAATGTTTTGGTGATGTGTTGGCCTTCGACACGACATACCAAAAAAATAAGTATAATAGGTCGTTGGTTGTCTTCTCAGGAACAAATCATCATGGACAAACATGCATTTTTGGTTGTGGTTTATTATCCGATGAGAAGCGGGAAACCTATGTTTTGGTGTTGAATATGTTCATGGAGATAATGGGTAATAAACAACCTATAGCCGTGGTGACAGATGGAGATCTTGCAATGAGGGAGGCAATAAAAGAAGTTCTTCCAAACGCTGCACACCGTCTTTGTGCATGGCATCTATACTGTAATGCCTGTAAAGCTATAAAAAATTCAAAATTCTTAGATGGGTTAAAGCACCTAATTTATGGAAAATTTTTTCCTGAAGAGTTTGAGAGAATATGGCATAACTTGATATCTGAGTACGGGCTTTTTGAGAATGAATGGTTGCAAAAGACATACGGGATCAAAGAAATGTGGGCTTCCTCATATTTAAATGATAAGTTTTTCGGTGGAATCAGGACTACGTCACAATGCGAAGGTATCCACTCCTTGATAAAGAATTACATTAGTAAAAAGTGCTACCTGTTGGAATTGATACACAACTTTAATGAAGCATTGACGCAATATCGGACAAATGAACTCTTATCCGATTTTAAATCATTGTTTACAACTCCTGTGTTGACGACGTGTCTTCAAGACATTGAGAAGCAAGCTGCCGATATTTTTACTAGAAGCATGTTTAAAGAGGTTCGGTGTGAGATAGAAGAAGCTGGCAAATTAAATGTTGTTACACATTCAGTAAGCAACAATGAAGTTAAGGTGAGAATAAATAAATATAGGCAACCCGGGAGGGAATGTGAAGTACAATATGATAAAGTCACTAAAAAGTTTGCTTGTGATTGTCGTTTGTTTGAAAGTCGTAGCATTCCATGTTGTCATATTTTCTGTATTATGAGACATGGCCACATCGATATCATTCCTGATACTCTTGTCTGCACGAGGTGGACTAAAAATGCTAAGAAGGATTATGTATGTTCAGTTACATCCACAGAAACTGACTCTGAAAATATTGCTGGTATTAGATATGGTGCTCTAGCAACACTGTGTTTCACATTATGTGAGTCGGCATCAAAGAATCGAGATGACTTCATGGAGATTAGAGATGACATTTTTGGACTAATCCAAAAGCTTAAAAAGAGACGCGATCCCGAGTCCAAGGTTCTTTCTAATGCGTGTATGGTCGGTGACCCAACTGTTGTGAAGACAAAGGGAGCCCCTCGTCTAAATAGATGGGCAGTAAAATCTCGTAAGTGTTCTCATTGTACACGTCGTGGTCATACGATTCGAAGGTGTCCCAAATTATACAGCAGAGACGTCCTACATACTAGTCATCACCTATCGAGTGATAAACTCAATGATGTGAAGAGTTATTCTGAGGAAGAAACAAATTACCAAAGCAATGATGAGAGCAATGTTCAGAGTGTAGATCGCAGATATTTTAGTGACAATGGAACAAATAAATTAGCTACACAAAAGAATAAGAATGGAGTTAAGGCTACCAAGGTATGTTAA 2097 0.3863 MRQMVCNKEGTRRKKYLEMENRKKDHKPITRVMCQAKIRFHYDLILQKWRVTKFKETHNHDLIPPKYIQFVPAYRTMTDADKAQADSLHFYGVRTCHIMGFMVAQKGGPNRAGFTKKDQYNHFDRSRSAKIKDGDAHAALSYLISKADEDPLLQGKFTLKDGKLDNLVWADGSSITDYQCFGDVLAFDTTYQKNKYNRSLVVFSGTNHHGQTCIFGCGLLSDEKRETYVLVLNMFMEIMGNKQPIAVVTDGDLAMREAIKEVLPNAAHRLCAWHLYCNACKAIKNSKFLDGLKHLIYGKFFPEEFERIWHNLISEYGLFENEWLQKTYGIKEMWASSYLNDKFFGGIRTTSQCEGIHSLIKNYISKKCYLLELIHNFNEALTQYRTNELLSDFKSLFTTPVLTTCLQDIEKQAADIFTRSMFKEVRCEIEEAGKLNVVTHSVSNNEVKVRINKYRQPGRECEVQYDKVTKKFACDCRLFESRSIPCCHIFCIMRHGHIDIIPDTLVCTRWTKNAKKDYVCSVTSTETDSENIAGIRYGALATLCFTLCESASKNRDDFMEIRDDIFGLIQKLKKRRDPESKVLSNACMVGDPTVVKTKGAPRLNRWAVKSRKCSHCTRRGHTIRRCPKLYSRDVLHTSHHLSSDKLNDVKSYSEEETNYQSNDESNVQSVDRRYFSDNGTNKLATQKNKNGVKATKVC* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2549 698 MobiDBLite consensus disorder prediction 646 698 - -
Ahy6g2549 698 Pfam MULE transposase domain 184 276 IPR018289 -
Ahy6g2549 698 SUPERFAMILY Retrovirus zinc finger-like domains 601 631 IPR036875 GO:0003676|GO:0008270
Ahy6g2549 698 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 563 IPR031052 GO:0006355
Ahy6g2549 698 ProSiteProfiles Zinc finger SWIM-type profile. 459 497 IPR007527 GO:0008270
Ahy6g2549 698 MobiDBLite consensus disorder prediction 653 692 - -
Ahy6g2549 698 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
Ahy6g2549 698 PANTHER OS02G0262500 PROTEIN 21 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2549 Ahy-Chr6 110469084 110471841 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g2549 MULE 7.00E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2549 - - adu:107485383 1210.67