Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2534 ATGGTTTCTTCTCTGCTTTTGCTTCTTCTTACCCTTTTCCCTTCAAATGTTCACCCATTAAATTTCAATATAACAAATTTCAGTGATGTTGAGAGTGCAAGCAAAGATATGGCATATGAAGGTGATGCCAAAGTTGCCAACGGGTTCATAGAGCTCAACAGGTATGACTACTATCGAACCGGCCGAGCCGTTTACAGCCAGCCTTTGCACCTTTGGGATTCATCTGCTAAGATTCTCACAGACTTCACAACCTCTTTTAGATTCACTATTCAAGGACCAGAATCCAATAGTAGTGATTATAATGTACTTGCTGATGGATTTGCATTCCACATGGCTCCTTTGAGTTTCACAACTCCACCCAACTCAGCTGGTGGCAATTTTGGACTATTCAACATTTCCACACATTTTGGAATATCCCAAAATCAAATGTTTATGGTGGAATTTGACACATTCCAAAATAAAGATTATGATCCTCTAGAACTAGAGCACCATGTTGGGATCAACGAAAATTCTGTCAAATCCATCAATTATACTAAGTTTGATATTGAAGGAAACATTGGGAAACAAGGTCATGCTTTAATTACCTATAATTCTTCTAGCAAGAACCTTGTTGTGTCTTGGTCTTTCAATGGAGCTAGCACTCATACTCTGTCTTGTGAGATTGACCTCTCCAAAATCCTACCAGAGTATGTGACAGTTGGATTCTCAGCTGCAACTGGTTACCGCTCGAACACACAACACAATATTCATTCTTGGGAATTCAATTCGACTTTGGATTCCTCTGATTCTGAGGTAACCAGAAAGAAGAGGCAAAAGAGGATCATAGAAATTGTTGCAATGACTTGCTTAATAATTGTATTGGTGCTTATGGTATGTGTTTGTCTTATCAAGAAAAGAATTGCCAAGCTTCTACATGATGATGGCAACCGCAGACACAAAGTATCAGTCTCCAATGACTTGGACGAAGCATCACTACCTAGAAGATTCAAGTGCAAGGAATTAGTTCAAGCCACCAATGAGTTCTCAAATGATAGAAAGCTTGGAAGTGGAGGATCAAGTCAAGTTTACAAAGGTTTTCTAAGTCACTCAGGACGTGCAGTCGCAGTTAAGAGGATTTTCGCTGATATTCAAGGAGGCGAGAAAATATTCATCAATGAAGTGAAGATAATAAGCCGTCTTATACACAGAAACTTGGTGCAATTCATAGGGTGGTGCCACAACAAACAAGAGTTCTTCCTAGTTTTCGAGTACATGCCTAATGGAAGCCTAGACACTTATCTCTTTGGAAAAAGAAGAGCTCTGCCTTGGGATGCAAGGTACAAGATAGCTTTAGGTGTGGCCACGGCGCTTCATTATCTTCATGAAGATGCAGAACAATGTGTGCTTCATAGAGATATTAAGTCTGCTAACATTCTATTGGACACAGATTTTAGCACCAAGCTTTGTGATTTTGGCATGGCAAAATTGGTAGACCCAAGATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGGTACTTGGCACCAGAATATCTCAATGGAGGAAGGGCTAGCAAAGAATCAGACATGTATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATTCCTCTAGTGAAGTGGGTATGGCAACTCCATGTGGAAGGGAATATTCTGAATGCTGCTGATGAAGGATTGAACAAGAATTTTGATGAACTTCAAATGACATGCTTGCTAATTGTGGGACTATGGTGTACCAACCCGAACGACAAGGAAAGGCCGAAAGCAGCACAAGTGATCAAGGTTCTTCAACTTGAATCGCCACTACCTGAGCTTCAACATGATATGCATGATCATCCTCTTCAAGCAACCATGGTGAAGTTTAGAACTTCTTTTCAATCATCATCCATTAGCAATAGCCTTGTTATTGATGGACGTTAG 1956 0.4018 MVSSLLLLLLTLFPSNVHPLNFNITNFSDVESASKDMAYEGDAKVANGFIELNRYDYYRTGRAVYSQPLHLWDSSAKILTDFTTSFRFTIQGPESNSSDYNVLADGFAFHMAPLSFTTPPNSAGGNFGLFNISTHFGISQNQMFMVEFDTFQNKDYDPLELEHHVGINENSVKSINYTKFDIEGNIGKQGHALITYNSSSKNLVVSWSFNGASTHTLSCEIDLSKILPEYVTVGFSAATGYRSNTQHNIHSWEFNSTLDSSDSEVTRKKRQKRIIEIVAMTCLIIVLVLMVCVCLIKKRIAKLLHDDGNRRHKVSVSNDLDEASLPRRFKCKELVQATNEFSNDRKLGSGGSSQVYKGFLSHSGRAVAVKRIFADIQGGEKIFINEVKIISRLIHRNLVQFIGWCHNKQEFFLVFEYMPNGSLDTYLFGKRRALPWDARYKIALGVATALHYLHEDAEQCVLHRDIKSANILLDTDFSTKLCDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYLNGGRASKESDMYSFGIVALEIACGRKTYQDGEYHIPLVKWVWQLHVEGNILNAADEGLNKNFDELQMTCLLIVGLWCTNPNDKERPKAAQVIKVLQLESPLPELQHDMHDHPLQATMVKFRTSFQSSSISNSLVIDGR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2534 651 Gene3D Transferase(Phosphotransferase) domain 1 418 627 - -
Ahy6g2534 651 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Ahy6g2534 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 262 IPR013320 -
Ahy6g2534 651 PANTHER PUTATIVE-RELATED 5 624 - -
Ahy6g2534 651 CDD lectin_legume_LecRK_Arcelin_ConA 20 258 IPR001220 GO:0030246
Ahy6g2534 651 SMART serkin_6 341 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2534 651 Pfam Protein kinase domain 342 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2534 651 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2534 651 ProSitePatterns Legume lectins alpha-chain signature. 227 236 IPR000985 -
Ahy6g2534 651 SUPERFAMILY Protein kinase-like (PK-like) 325 628 IPR011009 -
Ahy6g2534 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Ahy6g2534 651 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Ahy6g2534 651 Pfam Legume lectin domain 20 266 IPR001220 GO:0030246
Ahy6g2534 651 PANTHER - 5 624 - -
Ahy6g2534 651 Gene3D - 18 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2534 Ahy-Chr6 110361745 110364750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2534 1 621 Receptor kinase-like Gene Family AT5G10530 44.076 1.17e-176 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy6g2534 Pkinase 4.70E-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2534 - - vun:114193012 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3233 16 148924337 148926497 Ahy6g2534 6 110361745 110364750 hybridization