Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2515 ATGGCTGATATTCACAAAATTGCTGACATCAATCCTACAATCGATAATTTGTGTGTACGTATACGAGTGATACGGTTATGGACACTACCAAGTTACGGAAATTCTCCATTGTCATACTCAATTGAGATGGGAGGAAAAATACACGCCTCAGTTAAGAAGGCTTTTGTGTCTCGATTCGTGAATTTGCTGGAGGAAGGAATATCTTACCAAATAAGATATTTTGGTGTTGGACTCAATAAGGGTTACTTCAAGACTACACATCATGAATACGTGGTTAATTTAAACCAACGTACTGATGTGCACAGACTTCTAGAATCGTCGAGTATCCCACGACATGGATTTAAGTTTGTGAGTTTTGACACTCTCAATGCTCCTGGGTATGATTGCACCTATTTAGTTGATGTTGTTGGATATCTTGTTGGAATTGGAAATGAGAAGACTCTTGAAAAGGATGGCAAATCTACCAAATATACTGTTATCGAATTAGAAATTGATGATGGCTTTGTAAGATTTGAAGAATCTAAAGGTAATATCGGCGGAATTTCAAATGAGGCTGCATTCTTAAAAATTTATCAAGGCAAAACTATCGAACAGTTAAAAGAATTCGATACGACTGGTGGTACGGCCAATGTGAATGCAACAAGTCCACATATGCTTTTACAAAAACTTTCAAATGTTCAAGATGTTGACTACACTGGTGGTTTGCTTCCAATTTCAAAGACATCCTCGATCATTGAAGGAGAGAAAGTAGAAGGTGCTAAGAATTTGTTGCTTGAATTCTCCAATGAAGTTGCTGCCAATGATGAATCCGAATTGTTGGAAAATGCCATTACACCAACTAAGCGATTATCCTCGAAGTCGGAAGAATCGAAGCACAATAATAGAGGAAATTCGAGTGATGGTTCCAATGATGAGCATTTTCAATCGGTGTTGTCGAACATTACAAATGGACTCAATACAGGTGAAAAGGAACGATGTTCCAATATTAGTGATATTAGTAATTCAGGTATCACATGCGAAGCATATGATAGCCCATGTCATCAGACAAGTCAACAACAGTTTCAACAAACATCAAACAATATCCACCAGTTGCAAAGTCAGCATTCATTGGAGTACTCAAATCGAATTAGATTGCAAAGGGATGCAAGACTGAATAGAAAGACTATGCTACTTCAAAAGAGACATGAAGTTGAGGATATTACTGAAAACACGACTATATTAGATGATTCTGTGCAAATTGAATACCCAGCCATATTCGATGTTGCTGAGAATACAGATATGATAGATATTGGTGACCCAGAATTTTTTTGTCGGCATTGCGACGCCATGATGTGGTACGAGGAGAGATCAGAAAAGTCTAAAACAGGATCCAATATTGAGTTCTCAATATGTTGTATGCGAGGGAAGGTACAACTGCCGTTTTTGCAACGTCCACCTCAACTCTTGCAAGGTTTAATATCTGGAGCAGACCAGAAAAGCAAACACTTTAGGGATAATATAAGAACTTATAATAGCATGTTTTGCTTCACGTCCCTCGGAGGTAAAATAGAGACCTCTATCAATGATGGGACAGGTCCTCCCCAGTTCATTGTGAGTGGACAAAACTACCACAGAATTGGAAGCTTGGTGCCAATTGAGGGACAAAGACCAAAATTTGCGCAGTTATATATTTATGATACAGAAAATGAGGTCTCAAACAGGATAGAGATTTTTAGTTCAAGAACAAACAACAACAACATTGACCAGTCCTTAGTTCTAGATCTCAAGGACATGATCGATCAACATAATGTTCTTACTCACACATTTAGGATAGTCGCAGCTCTAATAGTAGGAGATTTTGATTCTGGAGATGCAGGACGTGATATTATAGTTCAATTAAAGTCTGGACATATGCAAAGGATTCATGAGACACACACCGCATTTATTCCTCTTCAGTACCCTATGATGTTTCCTTACGGTGAAGATGGCTACCAAGAAGACATTCCTTTGCGAGAATCTCATAGGGCTGATGAAAATAGAAAGAGACAGCGTGTGAGGAGTGATATATACAAAGGGATTCAAGATGCAGTTGTTAGGGGTGAGACACGTGCTTCTAAAGCAGGTAAGCGTATCATCCTACCTGCGTCATTCACTGGTGGTATGAGATACATGTTTAATAATTGTCAAGATGCTATGGCAATTTGTAAGAAATATGGATATCCAGACCTCTTCATCACAATGACATGTAACTCAAGTTGGCAAGAGATTGGCAGGGTTAACAATCCAAGGACCTTAAAGGTTGAAGACCGGCCGGATATATCATATAGAGTATTCAAAATTAAGCTTGACATGATAATCTCGGATCTTAAGCAAGGAATTCCATTTGGAGTGCTAGATGCAGGGATGTATACGGTGGAATTCCAAAAAAGAGGTCTACCACATGCTCACATTCTTTTATGGTTAAGTGGAGACCATAAGATAACAACGACAACTCAAATTGATCAGTTAATATCTTCAGAGTTGCCAGATCCTGCTCAGCATCCAAAATTGTTTAGAGCTGTATCTACATATATGATTCATGGACCATGTGGTAGAGCATTCTCAAAATCTTCCTGCATGAAAGATGGGTACTGCACCAAATATTATCCCAAGACATTCAGTAAAACCACAGTTATCGATAATAGTGGATACCCATCGTATAGAAGACGAGACACAGGGTAG 2700 0.3859 MADIHKIADINPTIDNLCVRIRVIRLWTLPSYGNSPLSYSIEMGGKIHASVKKAFVSRFVNLLEEGISYQIRYFGVGLNKGYFKTTHHEYVVNLNQRTDVHRLLESSSIPRHGFKFVSFDTLNAPGYDCTYLVDVVGYLVGIGNEKTLEKDGKSTKYTVIELEIDDGFVRFEESKGNIGGISNEAAFLKIYQGKTIEQLKEFDTTGGTANVNATSPHMLLQKLSNVQDVDYTGGLLPISKTSSIIEGEKVEGAKNLLLEFSNEVAANDESELLENAITPTKRLSSKSEESKHNNRGNSSDGSNDEHFQSVLSNITNGLNTGEKERCSNISDISNSGITCEAYDSPCHQTSQQQFQQTSNNIHQLQSQHSLEYSNRIRLQRDARLNRKTMLLQKRHEVEDITENTTILDDSVQIEYPAIFDVAENTDMIDIGDPEFFCRHCDAMMWYEERSEKSKTGSNIEFSICCMRGKVQLPFLQRPPQLLQGLISGADQKSKHFRDNIRTYNSMFCFTSLGGKIETSINDGTGPPQFIVSGQNYHRIGSLVPIEGQRPKFAQLYIYDTENEVSNRIEIFSSRTNNNNIDQSLVLDLKDMIDQHNVLTHTFRIVAALIVGDFDSGDAGRDIIVQLKSGHMQRIHETHTAFIPLQYPMMFPYGEDGYQEDIPLRESHRADENRKRQRVRSDIYKGIQDAVVRGETRASKAGKRIILPASFTGGMRYMFNNCQDAMAICKKYGYPDLFITMTCNSSWQEIGRVNNPRTLKVEDRPDISYRVFKIKLDMIISDLKQGIPFGVLDAGMYTVEFQKRGLPHAHILLWLSGDHKITTTTQIDQLISSELPDPAQHPKLFRAVSTYMIHGPCGRAFSKSSCMKDGYCTKYYPKTFSKTTVIDNSGYPSYRRRDTG* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2515 899 Pfam Helitron helicase-like domain at N-terminus 673 812 IPR025476 -
Ahy6g2515 899 PANTHER DNA BINDING PROTEIN-LIKE 423 673 - -
Ahy6g2515 899 PANTHER BNACNNG11690D PROTEIN 423 673 - -
Ahy6g2515 899 Gene3D - 108 171 IPR012340 -
Ahy6g2515 899 PANTHER BNACNNG11690D PROTEIN 675 898 - -
Ahy6g2515 899 Pfam Domain of unknown function DUF223 42 120 IPR003871 -
Ahy6g2515 899 MobiDBLite consensus disorder prediction 271 307 - -
Ahy6g2515 899 MobiDBLite consensus disorder prediction 284 299 - -
Ahy6g2515 899 CDD RPA1_DBD_A_like 18 100 - -
Ahy6g2515 899 Gene3D - 3 105 IPR012340 -
Ahy6g2515 899 SUPERFAMILY Nucleic acid-binding proteins 2 106 IPR012340 -
Ahy6g2515 899 PANTHER DNA BINDING PROTEIN-LIKE 675 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2515 Ahy-Chr6 110140386 110148847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2515 4 142 Core DNA Replication Machinery Family AT5G08020 25.000 2.19e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2515 - - ahf:112805939 1796.17