Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2502 ATGGATGAAAAGGTGGAAGCTCTTCAAGTGGAATTGCAACGAGTGAAAGAGGAGAATAGTGCTCTAAGATTGATGTTTGAGGTTCTAAGCAACAAATTCAAAAGCCTTCAATCCCAAATTCAAGATATAAACAAGGAATCAGAGCAAATAATAGGCTTCAATAATTCAATGCCTATTGTTGACTCAACAAATTGCAAGAGACCAAGACTAGAGTTTCCGACAGCTAAAAGGCCATTGCAAATCTTTGTCAGAACCAACCCCAAGGATGATACTTTGATGATAAGAGATGGATATCAATGGAGGAAGTATGGACAGAAGGTTACCAAAGACAATGTTTCACCAAGAGCCTACTTCAGGTGTTCCATGGCCCCTAGTTGCCCAGCCAAGAAGAAGGTGCAAAAATGCATACATGACAAGTCTATATTAGTTGCAACTTATGATGGAGAGCACAACCATGCTGCAATTCAAGATTCTTCAATGCCTTCTTCATCCACTCCCAAAGGCTCAGTGGCTAATAAAAATAACAATAATAATAGTAAAAATAATAATGATTTACCTCTTCCAATCTTAGAAAATTATAAAAAATGGTCTCATCAAACAGATTCAATAAGACTATATTGTGATGATGTTACTATGCAAAAAAGTAACACCAAAATTGAAGAATATGCAAATTCCTTAATCAAAGATCCTGAGTTCACTGCAGCATTGGCTGAAGCAGTTGCACGCACCATCACTGGTCAGAGTAAGGAACAAGACCTAAACCTCAATTTGGGGTTCCAGCAGGGTGATGAAAACTGA 798 0.3784 MDEKVEALQVELQRVKEENSALRLMFEVLSNKFKSLQSQIQDINKESEQIIGFNNSMPIVDSTNCKRPRLEFPTAKRPLQIFVRTNPKDDTLMIRDGYQWRKYGQKVTKDNVSPRAYFRCSMAPSCPAKKKVQKCIHDKSILVATYDGEHNHAAIQDSSMPSSSTPKGSVANKNNNNNSKNNNDLPLPILENYKKWSHQTDSIRLYCDDVTMQKSNTKIEEYANSLIKDPEFTAALAEAVARTITGQSKEQDLNLNLGFQQGDEN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2502 265 SUPERFAMILY WRKY DNA-binding domain 90 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g2502 265 Coils Coil 5 46 - -
Ahy6g2502 265 Gene3D WRKY domain 80 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g2502 265 SMART WRKY_cls 94 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g2502 265 MobiDBLite consensus disorder prediction 154 186 - -
Ahy6g2502 265 ProSiteProfiles WRKY domain profile. 89 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g2502 265 PANTHER WRKY TRANSCRIPTION FACTOR 49 2 244 - -
Ahy6g2502 265 Pfam WRKY DNA -binding domain 96 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g2502 265 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 244 IPR044810 GO:0003700
Ahy6g2502 265 MobiDBLite consensus disorder prediction 155 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2502 Ahy-Chr6 110000028 110002988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2502 2 240 WRKY Transcription Factor Family AT1G80840 37.037 8.12e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy6g2502 WRKY 4.70E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2502 - - ccaj:109791737 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3202 16 148542622 148545425 Ahy6g2502 6 110000028 110002988 hybridization
Ahy6g2502 6 110000028 110002988 Ahy20g2079 20 117517205 117519430 PCT
Ahy6g2502 6 110000028 110002988 Ahy10g1635 10 94917202 94919745 PCT
Ahy20g2079 20 117517205 117519430 Ahy6g2502 6 110000028 110002988 PCT
Ahy10g1635 10 94917202 94919745 Ahy6g2502 6 110000028 110002988 PCT