Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2501 ATGGATTCAACATGCGTTGATACTTCACTCAACCTCAATCTTTCTCCTTCTCCAACTCATGTGAACCCTACTGTGGCAGAAGTAGTTTTGGTTGAAGAGTTACATCGTTTGAGTAGTGAGAACAAGAGGCTTACGGAAACGTTGACTCACATGTGCGTTAGCTATGAAGCTTTGCAGAAGCATTTGACCAAATTGATGAACACATCATCTGATTGTTATAATCATCATCAATCGCGGAAGAGAAAAGCTGAAAGCTATGAAAATTGTAACGATGAGGAGGAGTCATTATTCATCAAAAGGCCTAATAACATTGTTCATAATAATAATAATAATAATAAGGTTTCCAAGGTTCTTGTGAAGACAGATGCATCTGATTCTAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTGACTAGAGACAACCCTTCTCCAAGAGCGTACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAAAGAAGTGTTGAAGACCCAACAATACTTGTAGCAACATATGAAGGGGAGCACAACCATGGGCGTAGCCAAACTGAAATTTCACTTGTCTCATCCCAAAGCCATTCAAGTGAAACAATAATCCCTTTAGTTTCTTCACCATCATCACGTATTACGTCATCTCCAACTACTCTTGACTTGGTCAAAAATTCAATAAGTTCCGTTGACATTGATCACAATGCTCAAAACAAGTCTTCTTCTTCTTCTTATATCCATAAGTTTTTGGTTCAAGAAATGGCCACTTCCTTGACAAGTGATCCTAACTTCACGGCAGTACTTGCCACTGCAATTTCAGGAAAAATTCTAGAACACACTTCTCTGGAAAAATTGTGA 876 0.3916 MDSTCVDTSLNLNLSPSPTHVNPTVAEVVLVEELHRLSSENKRLTETLTHMCVSYEALQKHLTKLMNTSSDCYNHHQSRKRKAESYENCNDEEESLFIKRPNNIVHNNNNNNKVSKVLVKTDASDSSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGRSQTEISLVSSQSHSSETIIPLVSSPSSRITSSPTTLDLVKNSISSVDIDHNAQNKSSSSSYIHKFLVQEMATSLTSDPNFTAVLATAISGKILEHTSLEKL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2501 291 Gene3D WRKY domain 113 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g2501 291 SUPERFAMILY WRKY DNA-binding domain 129 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g2501 291 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g2501 291 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 284 - -
Ahy6g2501 291 SMART WRKY_cls 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g2501 291 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 284 IPR044810 GO:0003700
Ahy6g2501 291 ProSiteProfiles WRKY domain profile. 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2501 Ahy-Chr6 109974568 109976686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2501 3 290 WRKY Transcription Factor Family AT1G80840 42.812 1.21e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy6g2501 WRKY 1.40E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2501 - - gmx:100810978 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3200 16 148510557 148512497 Ahy6g2501 6 109974568 109976686 hybridization