Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2490 ATGGCAAACTGTCACCGGAACAACGTCGGATCCCTCGTTCTCGGCCACCACCCTACAAAGTCCTCCGCCGCTACCGTTAGCGGCAACGTCCGCCTGTGGAACTCCCTCTCCGCCGCCTCCTTCCGCCGCATTATCTTCGACGCCCTCAGCTGCGGTGGCGCCGCTTACCGCCGGAATAATCACACCGACTCAGCCTCCTCCACCGACGGATCCGATTCCGACTCTGAATGCCCGAAACCTAACCCTAACCCGAAGCGCAATGTGAGGTCCGAGAAGCTCTCGGATCTCCTGAGCATGGCGGATTCGGAGGTGGACGCGGAAACCGAGACGAAGAAGAAGGAGGAGGCTCTTGACGACCTGAAGCGCCTCGTGTCGGAGCTTCAGGCGGAGGATTCGCCTCCGGTAAAGCGAGTAGCCGCAGCTTCCGCCGTGAGGAGGCTGGCGAGGGAGGACGCTGAGGTTAGAGTGACGTTCGCAATGCTCGGAGCGATTCCGCCGCTTGCAGCCATGCTCGATTTAGAAGACCTCGATTCTCAGGTAGCTTCGCTCTACGCGTTGCTTAACCTTGGAATCGGAAACGATGCAAATAAAGCTGCTATTGTGAAAGTTGGGTCTGTACACAAGATGTTGAAGCTAATTGAATCTCCAGATTCTGTGGAAACATCAGTTTCAGAAGCAATAGTTGCAAACTTTCTCGGATTGAGTGCTTTGGATTCGAACAAACCAATAATTGGATCCTCTGCAGCAGTACCATTCCTAGTTAGAACCCTCCAGAATTTAGATAATAAAACAAGCTCCCAAGCCAAACAAGATGCTCTCAGAGCAATGTACAATCTTTCAATCTTCCCAGGCAATGTTTCATTCATTTTGGAAACCAACTTGGTCCCATTTCTGATAAACTCCGTAGGAGATATGGAAGTAACCAACCGAGCCCTCGCAATCCTAAGCAACTTGGTGTCAACAAGAGAGGGTAGGAAGGCCACTAGTGCCGTCCCGGATGCTTTCCCTATCCTTGTGGATGTGTTGAATTGGACTGACTCACCGGAATGCCAAGAAAAGGCATCTTATGTTTTGATGATAATGGCACACAAATCTTATGGCGATAGGCAGGCCATGATTGAGGCTGGGATTGCGTCGTCACTCCTTGAGTTGTCCCTTCTTGGCACCACATTGGCACAGAAAAGGGCCTCAAGGATATTGGAATGTTTGAGGGTAGACAAAGGGAAGCAGGTTTCAGGGAGCTTTGGAGGGAATTTAGGCGCAACGGTATCCGCCCCAATCTGCGGATCGTCATCGTCTTGTGCAAAGATGGATGGAGGGGGAAAGGATGGTTCGGACGAGGAGGAGGAGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAGTTAGTCCAGCAGAGTCTGCAAAACAATATGAGGAAGATTGCTAAAAGGGCCAATTTGCCTCAAGATACTGTTCCTTCAGATCATTTTAAATCACTCACTGCAAGTTCAACTTCGAAGAGCCTGCCATTTTGA 1515 0.5083 MANCHRNNVGSLVLGHHPTKSSAATVSGNVRLWNSLSAASFRRIIFDALSCGGAAYRRNNHTDSASSTDGSDSDSECPKPNPNPKRNVRSEKLSDLLSMADSEVDAETETKKKEEALDDLKRLVSELQAEDSPPVKRVAAASAVRRLAREDAEVRVTFAMLGAIPPLAAMLDLEDLDSQVASLYALLNLGIGNDANKAAIVKVGSVHKMLKLIESPDSVETSVSEAIVANFLGLSALDSNKPIIGSSAAVPFLVRTLQNLDNKTSSQAKQDALRAMYNLSIFPGNVSFILETNLVPFLINSVGDMEVTNRALAILSNLVSTREGRKATSAVPDAFPILVDVLNWTDSPECQEKASYVLMIMAHKSYGDRQAMIEAGIASSLLELSLLGTTLAQKRASRILECLRVDKGKQVSGSFGGNLGATVSAPICGSSSSCAKMDGGGKDGSDEEEEMMSEEKKAVKQLVQQSLQNNMRKIAKRANLPQDTVPSDHFKSLTASSTSKSLPF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2490 504 MobiDBLite consensus disorder prediction 478 504 - -
Ahy6g2490 504 MobiDBLite consensus disorder prediction 61 80 - -
Ahy6g2490 504 Gene3D - 260 413 IPR011989 -
Ahy6g2490 504 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 504 - -
Ahy6g2490 504 MobiDBLite consensus disorder prediction 61 88 - -
Ahy6g2490 504 SUPERFAMILY ARM repeat 119 403 IPR016024 -
Ahy6g2490 504 Coils Coil 445 465 - -
Ahy6g2490 504 MobiDBLite consensus disorder prediction 485 504 - -
Ahy6g2490 504 Coils Coil 103 130 - -
Ahy6g2490 504 MobiDBLite consensus disorder prediction 435 458 - -
Ahy6g2490 504 Gene3D - 112 259 IPR011989 -
Ahy6g2490 504 MobiDBLite consensus disorder prediction 1 22 - -
Ahy6g2490 504 SMART arm_5 282 320 IPR000225 GO:0005515
Ahy6g2490 504 SMART arm_5 324 363 IPR000225 GO:0005515
Ahy6g2490 504 SMART arm_5 193 236 IPR000225 GO:0005515
Ahy6g2490 504 SMART arm_5 151 191 IPR000225 GO:0005515
Ahy6g2490 504 SMART arm_5 237 281 IPR000225 GO:0005515
Ahy6g2490 504 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2490 Ahy-Chr6 109786736 109790378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2490 136 410 U-box Gene Family AT1G67530 30.142 3.25e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2490 - - mtr:MTR_1g014420 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3185 16 148220213 148223935 Ahy6g2490 6 109786736 109790378 hybridization
Ahy6g2490 6 109786736 109790378 Ahy20g2072 20 117122927 117125230 PCT
Ahy6g2490 6 109786736 109790378 Ahy10g1630 10 94331293 94333447 PCT
Ahy20g2072 20 117122927 117125230 Ahy6g2490 6 109786736 109790378 PCT
Ahy10g1630 10 94331293 94333447 Ahy6g2490 6 109786736 109790378 PCT