Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2487 ATGGAGAATTTTCGTAACTTGATAGTGTCCATAACCATATCACTCGGAGGAAAAATACACGCCTCAGTTAAGAAGGCTTTTGTGTCTCGATTCGTGAATTTGCTGGAGGAAGGAATATCTTACCAAATAAGATATTTTGGTGTTGGACTCAATAAGGGTTACTTCAAGACTACACATCATGAATACGTGGTTAATTTAAACCAACGTACTGATGTGCACAGACTTCCAGAATCGTCGAGTATTCCACGATATGGATTTAAGTTTGTGAGTTTTGACACTCTCAATGCTCCTGGGTATGATTGCACCTATTTAGTTGATGTTGTTGGATATCTTGCTGGAATTGGGAATGAGAAGACTCTTGAAAAAGATGGCAAATCTACCAAATATACTGTTATCGAATTAGAGATTGATGATGGAAAAATAATGGAGTGTGCACTTTTTGACAACTATGCACATGAATTAAATGCTTTTCTGGGATCTGGCAATAAGGATGGAGCTGTTGTCGTCTTACAGTTTGTTAGAGTGAAGTTATTTAACGGTAACATCGGCGGAATTCCAAATGAGGCTGCATTCTTAAAAATTTATCAAGGCAAAACCATCGAGCAGTTAAAAGAATTCGAAACGACTGGTGGTACGGCCAATGTGAATGCAACAGGTCCACATATGCTTTTACAAAAACTTTCAAATGTTCAAGTTGTGGCCGTCTCCTTTTATCCATAA 720 0.3792 MENFRNLIVSITISLGGKIHASVKKAFVSRFVNLLEEGISYQIRYFGVGLNKGYFKTTHHEYVVNLNQRTDVHRLPESSSIPRYGFKFVSFDTLNAPGYDCTYLVDVVGYLAGIGNEKTLEKDGKSTKYTVIELEIDDGKIMECALFDNYAHELNAFLGSGNKDGAVVVLQFVRVKLFNGNIGGIPNEAAFLKIYQGKTIEQLKEFETTGGTANVNATGPHMLLQKLSNVQVVAVSFYP* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2487 239 CDD RPA1_DBD_B_like 106 206 - -
Ahy6g2487 239 Pfam Domain of unknown function DUF223 16 92 IPR003871 -
Ahy6g2487 239 SUPERFAMILY Nucleic acid-binding proteins 17 80 IPR012340 -
Ahy6g2487 239 Gene3D - 80 216 IPR012340 -
Ahy6g2487 239 Gene3D - 9 77 IPR012340 -
Ahy6g2487 239 SUPERFAMILY Nucleic acid-binding proteins 86 182 IPR012340 -
Ahy6g2487 239 CDD RPA1_DBD_A_like 16 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2487 Ahy-Chr6 109759552 109763762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2487 16 152 Core DNA Replication Machinery Family AT2G06510 26.429 4.52e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2487 - - ahf:112805927 476.478