Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2486 ATGGCTACACCACATGATGAAAATAATGGAACAGTTTCAATTTCAAGGGTTGTGTGTGTGCATCCAAAGATTGAACAACCTCATAGGGTGTTAAGCCTCTCAAATTTGGATAGGCAGTGTCCAAGACTTATGCAATTGGTGTTCTTCTACAACAACTTGATGAAGAACGATCTGTCCCTCAATTCAGTGTTCAACAGCTTGAAAATTGGGTTGGAAGAGACCTTGATTATGTGGTACCCGGGTGCTGGAAGGTTGATGATGATGAACCCTAATAACAATAATAATAATAATCAAAGTGATGGAAAGCTCAATCTTTGGTGCAATAATGAAGGTGCAATTCTTGTGGAGGCTGAGACCAAAGCTAGAATCTCACAACTTGGGGATCTTTCTCAGTACAATGAGTTCTTCGAGAATCTTGTTTATAAGCCTGATTTTGATGCCAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTAACAAAATTTGGTTGTGGAGGGTATTCAATTGGCATTGGAACAAGCCACTCACTATTTGATGGACCAGCAACCTATGATTTCTTGTATGCATGGGCTTCAAATTCTGAAATTATGAAGGGTATTTCAGCTAAGCCTCTTGAGCTTCCAAAACCAGTGCATGAGAGGGGAATACTTCTAAGTAGTGGTAATAATAAGCAACAACTTTCAAAAGGGTCTCTGAATTTACCTTCAAGTTCGAATTTTTATGCTCATGATGAGCATAATCAACCAATTAGGGCTATGGCAGTACAACATTTATATCAACTCATAATGCAATCAACTGCAGCAGCCACACTAGTTCATAGTAGAAGTGAACCCTCCGAAAATAATTATCAAGAGAAGTGGGTTCTTAAGACCTATCATCTATCTGCTGCAATGATAGATAACTTGAAAAGGAAGTACTTATCTTCCATCAAGACAGGATCTCTTCCATTCTCAACCTTTGAGGTTCTTACAGCTCATCTCTGGAAGGCAAGGACAAAAGCTTTAGGGCTGAGCAAAGAGAAGGTAGTATGCCTTCAATTTGCAGTGGACACAAGGAACAAGATGGTGCCTCCATTACCAAAAGGCTTCAGTGGTAATGCTTATGTTCTTGCCTCACTTATGATGTCTGTGTCACAATTATTGGACCATTCTTCCCATGAATTGATCATTGAGAAAATAAGAGAAGCCAAAAATGCTGTGAACCATAGCTATGTCAAATCATACATTGATGCATTGGAGTTAGGCTCTAATAATTCTCTGCCTCCACTTAAGGAACTAACTCTTGTTAGTGATTGGACGAGAATGCCCTTCCATAACATTGAGTTCTTTCATGGAAGAAAAGCAGCTTATGCTTCTCCACTTGCCACTCCTGTTCCTCAGGTTGCTTATTTCATGCAGAGTCCATTTGATGTTGGTGGTGTTGACCTCAGGATTGGCTTTCAAGATGGAATAACCCTAAGTGCTTTTACTCAATGCTTCTTAATCTAA 1488 0.3952 MATPHDENNGTVSISRVVCVHPKIEQPHRVLSLSNLDRQCPRLMQLVFFYNNLMKNDLSLNSVFNSLKIGLEETLIMWYPGAGRLMMMNPNNNNNNNQSDGKLNLWCNNEGAILVEAETKARISQLGDLSQYNEFFENLVYKPDFDANFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIMKGISAKPLELPKPVHERGILLSSGNNKQQLSKGSLNLPSSSNFYAHDEHNQPIRAMAVQHLYQLIMQSTAAATLVHSRSEPSENNYQEKWVLKTYHLSAAMIDNLKRKYLSSIKTGSLPFSTFEVLTAHLWKARTKALGLSKEKVVCLQFAVDTRNKMVPPLPKGFSGNAYVLASLMMSVSQLLDHSSHELIIEKIREAKNAVNHSYVKSYIDALELGSNNSLPPLKELTLVSDWTRMPFHNIEFFHGRKAAYASPLATPVPQVAYFMQSPFDVGGVDLRIGFQDGITLSAFTQCFLI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2486 495 Pfam Transferase family 13 482 - -
Ahy6g2486 495 Gene3D - 265 491 IPR023213 -
Ahy6g2486 495 Gene3D - 8 229 IPR023213 -
Ahy6g2486 495 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 494 - -
Ahy6g2486 495 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 9 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2486 Ahy-Chr6 109720199 109724031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2486 12 481 Monolignol Biosynthesis Gene Families AT5G48930 25.786 2.41e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2486 K15400 - gmx:100779295 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3181 16 148174298 148178156 Ahy6g2486 6 109720199 109724031 hybridization