Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2485 ATGGCAGTGATTGATGAAAAAGATCATCATTTTCCTAAAGGAATGCGTGTTCTTGCTGTTGATGATGACCGAACATGTCTTATGGTTTTGAAGACTTTACTCCAGAAGTGCCATTATCAAGTAACAACCACAAACAGTGCAATAACAGCATTGAAACTATTGAGAGAGAAGAAGAACAAGTTTGATCTGGTAATCAGTGACGTTCACATGCCAGACATGGATGGTTTCAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACTTACCTGTCATAATGTTATCTGTAGATGATGATCCAAGAGTGATGATGAAGGGAATCATGCATGGAGCATGTTTCTATCTGGTGAAACCTGTTAGAATTGAGGAGCTGAAGAATATTTGGCAGCATGTAATTAGGAGGAACAAGCATGATTCCCAGGAGCCAGAAAAACCTAGTAACAACCACGAAAATCCTGATTCAGATCAGAGTTCAAAGGCAAATAAAAAGAGAAAGGAACAAGAAGATGAGGAGGAGGAGGAGGAGGATGAGAATGACCATGACAACGGTGATGATCCGTCGGCGCAAAAGAAGCCTCGCGTGGTTTGGTCCGTCGACTTGCACCGCAAATTTGTCACTGCCGTCGAGCAATTAGGCATTGACAGTAATTTCTCCGATCTCTCACTATGCTGTGTTTATCAAGGGCGGAAAGGGCTGAAACTCAGGTGTAGTCGAGTTTATGTGAAGTGGATAGCTGAGAGCCATTAG 744 0.4274 MAVIDEKDHHFPKGMRVLAVDDDRTCLMVLKTLLQKCHYQVTTTNSAITALKLLREKKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVDDDPRVMMKGIMHGACFYLVKPVRIEELKNIWQHVIRRNKHDSQEPEKPSNNHENPDSDQSSKANKKRKEQEDEEEEEEDENDHDNGDDPSAQKKPRVVWSVDLHRKFVTAVEQLGIDSNFSDLSLCCVYQGRKGLKLRCSRVYVKWIAESH* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2485 247 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 9 214 - -
Ahy6g2485 247 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 214 IPR045279 GO:0009736
Ahy6g2485 247 SUPERFAMILY CheY-like 13 139 IPR011006 -
Ahy6g2485 247 Gene3D - 14 152 - -
Ahy6g2485 247 Pfam Response regulator receiver domain 17 125 IPR001789 GO:0000160
Ahy6g2485 247 MobiDBLite consensus disorder prediction 134 189 - -
Ahy6g2485 247 Gene3D - 186 225 - -
Ahy6g2485 247 ProSiteProfiles Response regulatory domain profile. 16 131 IPR001789 GO:0000160
Ahy6g2485 247 CDD REC_typeB_ARR-like 17 131 - -
Ahy6g2485 247 SMART REC_2 15 127 IPR001789 GO:0000160
Ahy6g2485 247 MobiDBLite consensus disorder prediction 134 167 - -
Ahy6g2485 247 Coils Coil 156 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2485 Ahy-Chr6 109710828 109711992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2485 11 213 Response Regulator Gene Family AT4G31920 67.980 5.20e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy6g2485 Response_reg 3.90E-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2485 - K14491 ahf:112805922 483.026