Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2469 ATGAAGCTTCTTACAATAATGCTACTCATGTTGTTCCTTATTCTCCACAAACCAAGTTTCCTTCTTTCTTCAACAATTGATTACCCTTTTGCTCCTTCACCTCAAATTCAAGCCATTTCTACATCAATGGCTTCTTCACCTTCATCCCCTGGTTTTGAACAAGAGAATGAAAAGCAGGGCATGGATTCACACAGGAAAATGGTGATAGCTTTTGTTGTTGCCAGCACTGCACTTAGTGCACTCATTTTATGCCTCTTATTCTTCTGGATTTATTATCATACAAGCCATTCATCAAAATCCAAAAGGACAAGTGTTCAAAACTCAGGGCAAGATGCTGAGAAAGGGGCATATTTGAGCAAATTTAGTTCTATAAAGATGGTGGGTAAGAAGGGTTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAGGGCACAAATAATTTCAAGGAGAGTAATATTTTGGGGGAGGGTGGTTTTGGATGTGTTTATAAGGCTACTTTGGATGATAATTTGGATGTTGCTGTTAAAAAACTTCACTGTGAAAATCAATATGCTGAGACAGAATTTGAGAATGAGGTGGAATTGTTAAGTAAAATTCAGCATCCCAACATAATTTCTTTATTGGGTTGTAGCAATGATGGCATTACAAAGTTTATTGTCTATGAATTGATGCACAATGGATCATTGGAAACCCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAAAATATCTGCATGAGCACTGTTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCAAAGATTTGTGATTTTGGGCTTGCTATAACTGATGGGTCCCAAAATAAGAACAACATCAAGCTTTCAGGCACATTGGGGTATGTAGCTCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTTTGGAGCTTCTATTAGGAAGAAAGCCTGTGGAGAAACTGGCACCATCACAATGCCAATCTATTGTCACATGGGCCATGCCACATCTCACAGACAGATCCATGCTTCCAACTATTGTGGACCCTGTGATTAAGGATGCAATGGATCTCAAGCACTTGTACCAGGTTGCTGCCGTGGCTGTGTTGTGTGTGCAACCGGAGCCGAGTTACCGGCCGCTGATTGCGGATGTTCTGCACTCACTTATTCCTCTTGTACCTGTTGAGCTTGGAGGAACACTCAGAGTTCCACAAGTGACACAACAAGTTTTACCAATTGATGATGTTGCTGAGAATTCTAGTCACTCAATTTGA 1362 0.3965 MKLLTIMLLMLFLILHKPSFLLSSTIDYPFAPSPQIQAISTSMASSPSSPGFEQENEKQGMDSHRKMVIAFVVASTALSALILCLLFFWIYYHTSHSSKSKRTSVQNSGQDAEKGAYLSKFSSIKMVGKKGCVPIIDYKQIEKGTNNFKESNILGEGGFGCVYKATLDDNLDVAVKKLHCENQYAETEFENEVELLSKIQHPNIISLLGCSNDGITKFIVYELMHNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKICDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPSQCQSIVTWAMPHLTDRSMLPTIVDPVIKDAMDLKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLRVPQVTQQVLPIDDVAENSSHSI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2469 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Ahy6g2469 453 Gene3D Transferase(Phosphotransferase) domain 1 224 423 - -
Ahy6g2469 453 SUPERFAMILY Protein kinase-like (PK-like) 129 418 IPR011009 -
Ahy6g2469 453 PANTHER OS01G0750732 PROTEIN 38 439 - -
Ahy6g2469 453 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524
Ahy6g2469 453 CDD STKc_IRAK 154 421 - -
Ahy6g2469 453 Pfam Protein tyrosine and serine/threonine kinase 151 360 IPR001245 GO:0004672|GO:0006468
Ahy6g2469 453 Gene3D Phosphorylase Kinase; domain 1 108 223 - -
Ahy6g2469 453 ProSiteProfiles Protein kinase domain profile. 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2469 453 PANTHER BNAA04G14780D PROTEIN 38 439 - -
Ahy6g2469 453 SMART serkin_6 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2469 Ahy-Chr6 109492140 109498466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2469 62 422 Receptor kinase-like Gene Family AT3G58690 44.022 6.80e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Ahy6g2469 PK_Tyr_Ser-Thr 2.80E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2469 - - gmx:100812044 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3169 16 148013799 148020760 Ahy6g2469 6 109492140 109498466 hybridization
Ahy6g2469 6 109492140 109498466 Ahy20g2058 20 116106678 116110416 PCT
Ahy6g2469 6 109492140 109498466 Ahy10g1612 10 93258915 93262683 PCT
Ahy20g2058 20 116106678 116110416 Ahy6g2469 6 109492140 109498466 PCT
Ahy10g1612 10 93258915 93262683 Ahy6g2469 6 109492140 109498466 PCT