Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2460 ATGCAAGACTCTGTTTACCCCAGCTGCAGTTATTCAGCTAACCATGGTGATGCTGGAAACTCATTTGTGGCTCTCCTTTATGGCCCTCCATCCCTGTTGCAGTATGATTTCAAAGACTTGTCTGATCAGAAACTTTGTACCCCGTCTGGTAGTTGTACTGCTGCAAGTGGGAACTTTGTTGTTGATTGTAGTGATAGTGGAACCTTCCCAACATCTAGTGGTGGAATCTTTATTGAAAATTTAAATAGTCATAACCTGCAAAGCAGGCAAGATACTGTTCTTGATAGTTCTTCCAGGGGAATGGTTGGTCTGAGGGATAGTGTTCATTCTGTATTTCATGATATTCAGAGTAATAATGCTGCTGCACAGTCCACAGTCCCTGGTGGCAAAAAGGCAAGGGAACCTTTTTCTTCTAGGAGCCAATGGTGTGGTACAAACTCTGCATCCAGTCTAAATGTTTGTGCTACAGATAATCAAACTACGCCAAATATGGTTCCAGAACATTGCTCTTCCAACCTTAATTCTCTTTTAACGAGTGGATGCCCTCGTGTGTTCTGCATGGAAAAAAGTGGATATCTTCTTCTCAGCAATACAGGGCTTCTTGGTATTGTTTGCTTATGCCACTCTTGCCACATGTCAGTTCTTAAGTTTTGTGAGCATGCAGGGTTATATGGCATCAACCCAGGGGATGCTGTTCATATGGAAAATGGTGAGACCATTGCACAATGGAAGAATTTATACCTATTAAAGTTTGGGATTAGGTCTCTGGGCAATGAGAGTGAATGGGACTGGCCAGAAGTATTATCAACAACAGGAAGTCTGATGAGATCCAATTCATCTTCATCCAGTATGTCAAAGAGTGATTTATCTCAAATATTGAGTTCGTCCGCAGTCAGATTAAGGTCTGCAAAGCCTTGTGATTATGTTCCATTTCCAAAGGCCACCAGCACAGAACCCAGTTTACTTAGTGGTGTATTTCCCAGAGAAGAACCAAATACAATCCAGGAAAGTGGCAAAATTCCGCTCAAAGGTTTTGTTGGAACATGTACAACAACAAACATTGTTGGAATTCAAGGGGATGATGGTTGTCAACCTGTACCACCTTTCTTTGATTCCCTTAAACGAAATGGCAATTTTTCAGTTGCCCACTCTCCTTCACAAATTCCAACAAGCCTTCCAATAGATCATGAATGCATAAAAAACAATAATGAAAAAGATGTGCTTATAGGCAAAGATGCAGCATCGTCTAATATTGAGCTGAGGCTTGGACAACCCCCTCAGACAGGAAATCCAGTTCCATCATTTATAGGACATCCATTATTTAATGCCCTTGTCAGCCCTCCAAATTTGCATCTTGCAAAGCCAATGATTAATATGCATAGCAGTGAGGGGAAATTGCAGAATAATTTTTGCCATGGTTATGGTTCCTTCAAAATGGTTGATCAACCTCAGCCTAAAATCAAGAACTATATGCCTGGTGTTAGCAATGCTTTTGGTGGTGCAGCTAGATCAAAACCTGACAGTGCAGCCAACAGTTTGTTGTTTTCACCACTTCCACAGTTAAATCTTCAGCCAGAGGGAAAGACAAAAGCTAGTGAAATTTTGAAGAATGATAGTGGACCTGACATATCCAAGAAACATTATGAATTTAATGGCATGCAGTTTGCTCCTATTAATGTTCCCTGGAAAAATAATGGTCACACGGGAAGGCAATTGGATTGTTCAGCAGTGGGATCTATTAAAGGTTTGGGCAATGATGAAGGTGTTAACTTTGCTAAAGATCCTTGTGCTAAATTAAACTCTGGATTTGGAATTAGTAATCTAGTGAAATATCCAAGTTCCATCAGAGGAGCTGTTGGTGGCAATGGTAGTTGTATTTCAACTGTTAAAGGAAAGATATACGAGTCATATAATGAATCAAGGTTGCCGTTCGATACATCTGCTGGTGTAAATTTTCTCTGTGATTCTAAAAATGTGTCTTCTGTTGGACAAAAGAATCATTTCACCTCAGGGACGACAATTCCATTAGAAGGAATTCTGAAGGGCTTTCCCTTGCTTGTACCAAATTCTACATCAAATCAGACTACTACACCACAGCAACAGAGCATTAACTTGGACAGACCTTTGCTTGATGAAAATATGAGGTTGCTTGCAGTGACGCAGATACTGGAGTTATCTAAGCAACGACATGCATTGCATTTTCATAAAATGAATCAAAAGCACAAGAGATCCAGCAACACTTCAGAAGCTCATCCCGACGTATATGAGGCTTTGACGTCTGAACAGTTCTCTTTTGGCGCTACATTTAAATTGCCACAAAAAAGAGGTCCTTGTGGGAGTCCTGATACCACTGATGATTTAGAGAAGCTGGCTTCACTCACAGGTTTGAATAGATACTGTTTCTCTGGCTTGACAGCATTACCTTTACATTCTAAAGAAAAGAAATCACAATGTAAACAGGCCTACAATCTTCAAAATGAAGGGCAATCGTTGAGCCTTGGAATAAACAATGACAATACACTGTTTCAGAGATCAAGTGCATCCAACAATTTCACTGAGAAACCAGTGGATACGAATTTGGGAAGATACACTTTTGCTGCAGGGCAAAACCGTTCTAGTACCAATTTTTTTTTGGGAAATGGATCAACTTATAATTTTAAACAATTTGCAAAATCTAGTGGTGAAACTCCTTTGAAGATAATTTCAAAGGATGAAAGTACTCATCAATGGAGAGGTGTACCAAGTAAGCTATGGAAAGCAGATTGTGATGCAAAATCTTTAGATCCAATAGCAGCGGAAGGACAAGATGATGTTCAAAGTGTAAATGCTTCTGCTAAACGCTTCAAAAGGAATTTTAATATGGAAGACATGTTGAAAGTGCAAGAAAAGTCTAATGTCTCGACTGGGTCTTGTGCACCTATGGTCACTCAAGCTTCCATGGAATTCAATAAGATTGATTCTTGCATTATTGATGGTGGGGATGCTACTGATTCCAACAATCTTGTACTTGATGAGGGCTCAGTAATCAATAAAGGTTGGTCACCTGATGCAGTTGAAAGTGAAAGAAGTTCTGAGTTTTTAGGCTCCACATGTGAGAGTTACTTGAACAAAGGTCATTTGAGAGTCATAAATGATCAAGATAAACCATGTCGTAGTCTCCTTGATGAGCTTAAGCTGTTAGATTCTATGACAAGGCAAAAAAGCCAGGACCAAAGTCATATACTTTCTGGTCATTATAAAGCCAATCAATCTCAAAATGTCAAGGACTTAAAAGGAAAAAAGAAAAGGAGAAATAGGCTGAAGAATTTAGATGCCTCATTGCCTTCACCTTTCTTATTGCATAACAAGAACGATGAAAGGCAAATGTACTTTCCATCAACTCAGCGAAAATCATCTGCTAATGCCGCTTTTCTCCAGTCTAATGCCAAGCATAAACACACTGCTTTGTCACCCAAATTTCCTGGTAACCATTTTCTGAGTGCACGTCATAGTGACAAAGAAGATAGTCATGTGTCGGAATCAAGTTCAGATGACGAGTTTCGTAGCTTACATGACGTTCCTAGAAGAAAGAAACAAAGAGCATATTTCCCTTCTGATTGTGTTGGGCATTTTCAAATGCAAGATCCAGATTTGGAGGAAACTGAAATTGGCAAGGTTGAGTCAATGTTTACCAGGGGGACAAATGCCAATAGAATCACAAGGCCAATAGTATGTGGAGAATATGGTGAAATATGCAGTGAAGAATTGGCTGGAGAATTGCCAAAAATTCCAAAATTTGTTTCTCTCAGTAAGGTTCTTAAAAGTGCCAAAAGATGTAAGGTACCTAGATTAACTTCGAAAAAGAAATTGAAGAGATTGAGCTTTGGAAGTAATGAACACTGCTGTGGTCAACCCGGTTTGGAGAGGGGCAACACGTCACTTGTTATTTTCAAAGCAAAGAGAGAATCCAAAGCTATACATGGTAATAGTATTGTAAACATAGCTCCATTGAAGCTGAAGAACAAGGAAACTAGGAAAGTACGCAGTATTAATGAACTGACTGCTAAAGAAACCAAAGTGAAGGATATTGTGGTGGAGTATGGTGAAGATAAGGAGCATGGTTGGTGTAACACCAAAAGCAGAAACTTTGTTCAAGAATGCATGGGAATCTCCATCCAAAATTCAGACGCATTCTGCTCTGTGTGCCAAAACTCGAGCAATGATGACATTAACTGTTTGTTGGAGTGTAGTCGCTGTCTAATTAGAGTTCATCAGGCTTGCTATGGAATCTCCACATTACCTAAAAAAGGCCGTTGGTGTTGTAGACCATGCCGAACAAACTCAAAAGACATTGCTTGTGTCCTGTGTGGTTATGGAGGTGGAGCCATGACTCGAGCAACACAGAATCGCACAATGGTGAAAAGCCTCTTAAAAGCGTGGAGTATTGAAAAAGGTGGCATGTCTAAGCATAGTACTACACCTGAACTTTTTGAGAAGGAAACAGATGTATTTGATTCCACAAAATCTGAACTAAAATTTGACCAAACATGTGGTTTGAAGTCTGGGAATGTTGAGATCTCAAGATCAGACCAGTTGAAAGTTGAGATGTCAACAAATCAAATGCAAAATGTCCCTTACAATATTTTAAAGGTTCATAACAGCATTACAGCAGGAGTTCATGATACATCTGTAAAGCAGTGGATTCATATGGTTTGTGGGCTTTGGACTCCTGGAACAAGATGCCCGAATGTTAATACAATGAGTGCTTTTGATGTATCTGGTGTTACACTTCCCAGAGAAGATGTGGTTTGTTCCATCTGCAACCGCTGGGGTGGTTCTTGTATAGAGTGCAGGATTGTCAATTGTTTGGTCAAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAATGTGAGACTGAAGGCGATGATGATGAGAACGTTGGATTTTATGGAAGATGTATGCTTCATGCTGTTGACCCTAGATATCAGTCCAAGTATGATCCTGTTGATGATATAGATAGCTTAGAAGAAAGGGAATTTACCTGTGCCAGGACAGAGGGTTACAAGGGCTGTAAACGGGATGGTTTCCATAGATATTGTTACAGTGCCTTAAAGGGAAAGGGAGGAAGTGGATGCCTTGTTCCTGAAGAACAGTTAAATGCTTGGATTCACATTAATGGGCAGAAATTGTGTCCACAAAGACTCCCTAAGCCCGCATCAGATATTGAGCATGATTGTCGGAAGGAATATGCTCGGTACAAGCTAGCAAAGGGCTGGAAACACCTTGTTGTTTACAAATCTGGAATTCATGCCCTTGGTCTTTACACTTCTCGATTCATTTCCCGTGGTGAAATGGTTGTTGAGTATGTTGGCGAAATTGTGGGGTCACGGGTAGCTGATAAAAGAGAGATTGAATATCAATCTGAAAGAAAACTTCAGTACAAGGGTGCTTGCTACTTCTTCAGGATTGACAAAGAACATATTATTGATGCCACAAAGAAAGGGGGCATAGCCCGTTATGTTAATCACTCATGCTTGCCGAATTGCGTGGCGAAAGTGGTTACTATAAGGCATGAGAAGAAGGTTGTCTTTTTTGCGGAGAGGGACATATATCCTGGTGAAGAAATAACATACGATTACCACTTTAACAACGAAGATGAAGGAAAGAAGATTCCATGTTATTGCAATTCCAAAAATTGCAGGCGCTATCTTAACTGA 5703 0.4003 MQDSVYPSCSYSANHGDAGNSFVALLYGPPSLLQYDFKDLSDQKLCTPSGSCTAASGNFVVDCSDSGTFPTSSGGIFIENLNSHNLQSRQDTVLDSSSRGMVGLRDSVHSVFHDIQSNNAAAQSTVPGGKKAREPFSSRSQWCGTNSASSLNVCATDNQTTPNMVPEHCSSNLNSLLTSGCPRVFCMEKSGYLLLSNTGLLGIVCLCHSCHMSVLKFCEHAGLYGINPGDAVHMENGETIAQWKNLYLLKFGIRSLGNESEWDWPEVLSTTGSLMRSNSSSSSMSKSDLSQILSSSAVRLRSAKPCDYVPFPKATSTEPSLLSGVFPREEPNTIQESGKIPLKGFVGTCTTTNIVGIQGDDGCQPVPPFFDSLKRNGNFSVAHSPSQIPTSLPIDHECIKNNNEKDVLIGKDAASSNIELRLGQPPQTGNPVPSFIGHPLFNALVSPPNLHLAKPMINMHSSEGKLQNNFCHGYGSFKMVDQPQPKIKNYMPGVSNAFGGAARSKPDSAANSLLFSPLPQLNLQPEGKTKASEILKNDSGPDISKKHYEFNGMQFAPINVPWKNNGHTGRQLDCSAVGSIKGLGNDEGVNFAKDPCAKLNSGFGISNLVKYPSSIRGAVGGNGSCISTVKGKIYESYNESRLPFDTSAGVNFLCDSKNVSSVGQKNHFTSGTTIPLEGILKGFPLLVPNSTSNQTTTPQQQSINLDRPLLDENMRLLAVTQILELSKQRHALHFHKMNQKHKRSSNTSEAHPDVYEALTSEQFSFGATFKLPQKRGPCGSPDTTDDLEKLASLTGLNRYCFSGLTALPLHSKEKKSQCKQAYNLQNEGQSLSLGINNDNTLFQRSSASNNFTEKPVDTNLGRYTFAAGQNRSSTNFFLGNGSTYNFKQFAKSSGETPLKIISKDESTHQWRGVPSKLWKADCDAKSLDPIAAEGQDDVQSVNASAKRFKRNFNMEDMLKVQEKSNVSTGSCAPMVTQASMEFNKIDSCIIDGGDATDSNNLVLDEGSVINKGWSPDAVESERSSEFLGSTCESYLNKGHLRVINDQDKPCRSLLDELKLLDSMTRQKSQDQSHILSGHYKANQSQNVKDLKGKKKRRNRLKNLDASLPSPFLLHNKNDERQMYFPSTQRKSSANAAFLQSNAKHKHTALSPKFPGNHFLSARHSDKEDSHVSESSSDDEFRSLHDVPRRKKQRAYFPSDCVGHFQMQDPDLEETEIGKVESMFTRGTNANRITRPIVCGEYGEICSEELAGELPKIPKFVSLSKVLKSAKRCKVPRLTSKKKLKRLSFGSNEHCCGQPGLERGNTSLVIFKAKRESKAIHGNSIVNIAPLKLKNKETRKVRSINELTAKETKVKDIVVEYGEDKEHGWCNTKSRNFVQECMGISIQNSDAFCSVCQNSSNDDINCLLECSRCLIRVHQACYGISTLPKKGRWCCRPCRTNSKDIACVLCGYGGGAMTRATQNRTMVKSLLKAWSIEKGGMSKHSTTPELFEKETDVFDSTKSELKFDQTCGLKSGNVEISRSDQLKVEMSTNQMQNVPYNILKVHNSITAGVHDTSVKQWIHMVCGLWTPGTRCPNVNTMSAFDVSGVTLPREDVVCSICNRWGGSCIECRIVNCLVKFHPWCAHQKNLLQCETEGDDDENVGFYGRCMLHAVDPRYQSKYDPVDDIDSLEEREFTCARTEGYKGCKRDGFHRYCYSALKGKGGSGCLVPEEQLNAWIHINGQKLCPQRLPKPASDIEHDCRKEYARYKLAKGWKHLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGSRVADKREIEYQSERKLQYKGACYFFRIDKEHIIDATKKGGIARYVNHSCLPNCVAKVVTIRHEKKVVFFAERDIYPGEEITYDYHFNNEDEGKKIPCYCNSKNCRRYLN* 1901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2460 1900 Pfam SET domain 1768 1875 IPR001214 GO:0005515
Ahy6g2460 1900 MobiDBLite consensus disorder prediction 1068 1086 - -
Ahy6g2460 1900 Pfam Tify domain binding domain 200 245 IPR032308 -
Ahy6g2460 1900 MobiDBLite consensus disorder prediction 1140 1188 - -
Ahy6g2460 1900 CDD SET_SETD1-like 1757 1896 - -
Ahy6g2460 1900 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1377 1451 IPR013083 -
Ahy6g2460 1900 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1541 1653 IPR013083 -
Ahy6g2460 1900 ProSiteProfiles Post-SET domain profile. 1884 1900 IPR003616 -
Ahy6g2460 1900 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 9 1900 - -
Ahy6g2460 1900 MobiDBLite consensus disorder prediction 1159 1188 - -
Ahy6g2460 1900 SMART PostSET_3 1884 1900 IPR003616 -
Ahy6g2460 1900 ProSiteProfiles SET domain profile. 1755 1876 IPR001214 GO:0005515
Ahy6g2460 1900 ProSiteProfiles Extended PHD (ePHD) domain profile. 1538 1652 IPR034732 -
Ahy6g2460 1900 CDD ePHD 1554 1639 - -
Ahy6g2460 1900 SMART PHD_3 1391 1438 IPR001965 -
Ahy6g2460 1900 SMART PHD_3 1596 1652 IPR001965 -
Ahy6g2460 1900 SMART set_7 1755 1882 IPR001214 GO:0005515
Ahy6g2460 1900 SUPERFAMILY FYVE/PHD zinc finger 1387 1442 IPR011011 -
Ahy6g2460 1900 SUPERFAMILY SET domain 1754 1900 IPR046341 -
Ahy6g2460 1900 Pfam PHD-finger 1404 1438 - -
Ahy6g2460 1900 MobiDBLite consensus disorder prediction 1068 1114 - -
Ahy6g2460 1900 Gene3D SET domain 1654 1900 IPR046341 -
Ahy6g2460 1900 ProSiteProfiles Zinc finger PHD-type profile. 1389 1440 IPR019787 -
Ahy6g2460 1900 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 9 1900 - -
Ahy6g2460 1900 Pfam PHD-zinc-finger like domain 1553 1636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2460 Ahy-Chr6 109272290 109286822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2460 1757 1900 C2H2 Transcription Factor Family AT2G23740 33.333 3.52e-15 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy6g2460 SET 1.90E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2460 - - ahf:112697527 3826.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3161 16 147839263 147853769 Ahy6g2460 6 109272290 109286822 hybridization