Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2438 ATGTTTTCCAAACACAATGCTCCAAAACCACAAGATCCAAGGCTCAAGGCCATCACTGAAGCCATCAGAGTCGTTCCTCACTTCCCCAAACAAGGGATAATGTTTCAGGACATAACGACATTGTTGTTGGATCATAAGGTTTTTAAGGACACAATTGACATTTTTGTTGATCGTTACAAAGACATGGGAATTTCCATTGTTGCCGGAGTGGAAGCTAGGGGATTCTTTTTTGGCCCCTCAATAGCATTAGCCATTGGTTCAAAGTTTGTTCCTTTGCGCAAACCTCGAAAGCTACCAGGTGAAGTAATATCAGAAAAATATGATCTAGAATATGGAAGTGATTGTTTGGAGATGCATGTTGGTGCTGTGAAACATGGTGACAAAGCCATTGTTATTGATGATTTGGTGGCTACAGGTGGAACTCTATCTGCAGCAATTACTCTCCTAGAACGTGGTGGTGCTGAAGTAGTGGAATGTGCTTGTATCATTGGTCTGTCTCATTTTAAGGATGATTGCAGCGTGAATGGCAAACCACTTTATTTCCTTGTGGAACCGCGTCTTCAATAA 567 0.4162 MFSKHNAPKPQDPRLKAITEAIRVVPHFPKQGIMFQDITTLLLDHKVFKDTIDIFVDRYKDMGISIVAGVEARGFFFGPSIALAIGSKFVPLRKPRKLPGEVISEKYDLEYGSDCLEMHVGAVKHGDKAIVIDDLVATGGTLSAAITLLERGGAEVVECACIIGLSHFKDDCSVNGKPLYFLVEPRLQ* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2438 188 CDD PRTases_typeI 52 184 IPR000836 -
Ahy6g2438 188 Gene3D - 6 184 IPR029057 -
Ahy6g2438 188 Hamap Adenine phosphoribosyltransferase [apt]. 18 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Ahy6g2438 188 SUPERFAMILY PRTase-like 22 165 IPR029057 -
Ahy6g2438 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 2 186 - -
Ahy6g2438 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 186 - -
Ahy6g2438 188 Pfam Phosphoribosyl transferase domain 58 163 IPR000836 -
Ahy6g2438 188 TIGRFAM apt: adenine phosphoribosyltransferase 19 178 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2438 Ahy-Chr6 108902383 108906633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2438 11 184 PRT Gene Family AT1G27450 67.816 9.62e-85 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2438 K00759 - pop:7468647 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3139 16 147493348 147497865 Ahy6g2438 6 108902383 108906633 hybridization
Ahy6g2438 6 108902383 108906633 Ahy18g2721 18 130609245 130613595 PCT
Ahy6g2438 6 108902383 108906633 Ahy8g2466 8 47392840 47397216 PCT
Ahy18g2721 18 130609245 130613595 Ahy6g2438 6 108902383 108906633 PCT
Ahy8g2466 8 47392840 47397216 Ahy6g2438 6 108902383 108906633 PCT